RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 ATRIPQ8WXE1 791 aa17■□□□□ 0.31
IFT20-216ENST00000588477 FGF13Q92913 245 aa17■□□□□ 0.31
IFT20-216ENST00000588477 KCNB2Q92953 911 aa17■□□□□ 0.31
IFT20-216ENST00000588477 FAM20AQ96MK3 541 aa17■□□□□ 0.31
IFT20-216ENST00000588477 RGL1Q9NZL6 768 aa17■□□□□ 0.31
IFT20-216ENST00000588477 KLK14Q9P0G3 267 aa17■□□□□ 0.31
IFT20-216ENST00000588477 FBXW11Q9UKB1 542 aa17■□□□□ 0.31
IFT20-216ENST00000588477 KMT2BQ9UMN6 2715 aaPredicted RBP16.99■□□□□ 0.31
IFT20-216ENST00000588477 CCL16O15467 120 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 ATXN1P54253 815 aaKnown RBP16.99■□□□□ 0.31
IFT20-216ENST00000588477 GRIK3Q13003 919 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 TFDP1Q14186 410 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 CTTNQ14247 550 aaKnown RBP16.99■□□□□ 0.31
IFT20-216ENST00000588477 MXD4Q14582 209 aaPredicted RBP16.99■□□□□ 0.31
IFT20-216ENST00000588477 EPHA7Q15375 998 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 NPY5RQ15761 445 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 LIN9Q5TKA1 542 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 KRT25Q7Z3Z0 450 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 CEP57Q86XR8 500 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 GPR161Q8N6U8 529 aaKnown RBP16.99■□□□□ 0.31
IFT20-216ENST00000588477 DAGLBQ8NCG7 672 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 HASPINQ8TF76 798 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 DYDC2Q96IM9 177 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 AIFM3Q96NN9 605 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 CLSTN3Q9BQT9 956 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 PAAF1Q9BRP4 392 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 OSBPL6Q9BZF3 934 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 KCNMB3Q9NPA1 279 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 XPNPEP1Q9NQW7 623 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 PARP2Q9UGN5 583 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 PCDHGA2Q9Y5H1 932 aa16.99■□□□□ 0.31
IFT20-216ENST00000588477 CDC45O75419 566 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 DEXIO95424 95 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 NPTXRO95502 500 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 C8AP07357 584 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 HNRNPA1P09651 372 aaKnown RBP eCLIP16.98■□□□□ 0.31
IFT20-216ENST00000588477 SDHBP21912 280 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 CYP4A11Q02928 519 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 MBTD1Q05BQ5 628 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 HSP90AA2PQ14568 343 aaPredicted RBP16.98■□□□□ 0.31
IFT20-216ENST00000588477 AMHR2Q16671 573 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 NCAPH2Q6IBW4 605 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 ITFG1Q8TB96 612 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 SECISBP2LQ93073 1101 aaKnown RBP16.98■□□□□ 0.31
IFT20-216ENST00000588477 KXD1Q9BQD3 176 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 LTB4R2Q9NPC1 389 aa16.98■□□□□ 0.31
IFT20-216ENST00000588477 PDCD11Q14690 1871 aaKnown RBP16.98■□□□□ 0.31
IFT20-216ENST00000588477 SF3B1O75533 1304 aaKnown RBP eCLIP16.97■□□□□ 0.316e-6■■■■■ 103.4
IFT20-216ENST00000588477 B4GALT5O43286 388 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 MARCH6O60337 910 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 HSPA4P34932 840 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 EVCP57679 992 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 PFKPQ01813 784 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 POU5F1BQ06416 359 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 CAPSQ13938 189 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 PSMD5Q16401 504 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 ZBTB41Q5SVQ8 909 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 FAM171A1Q5VUB5 890 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 GALNT17Q6IS24 598 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 SLC27A1Q6PCB7 646 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 RSPO2Q6UXX9 243 aaPredicted RBP16.97■□□□□ 0.31
IFT20-216ENST00000588477 IFNLR1Q8IU57 520 aaPredicted RBP16.97■□□□□ 0.31
IFT20-216ENST00000588477 TPH2Q8IWU9 490 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 ZBTB44Q8NCP5 570 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 LNX1Q8TBB1 728 aaPredicted RBP16.97■□□□□ 0.31
IFT20-216ENST00000588477 HAS1Q92839 578 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 TTPALQ9BTX7 342 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 PHF20Q9BVI0 1012 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 ZSWIM4Q9H7M6 989 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 ZSCAN32Q9NX65 697 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 KCNJ14Q9UNX9 436 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 TICRRQ7Z2Z1 1910 aa16.97■□□□□ 0.31
IFT20-216ENST00000588477 GPR179Q6PRD1 2367 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 CCDC194A0A1B0GVG4 234 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 CPLX1O14810 134 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 CCNT1O60563 726 aaKnown RBP16.96■□□□□ 0.31
IFT20-216ENST00000588477 XYLBO75191 536 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 MAGEA9P43362 315 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 TUSC3Q13454 348 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 PPP4R3AQ6IN85 833 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 TSSK4Q6SA08 328 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 NEK8Q86SG6 692 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 ASAP3Q8TDY4 903 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 PIK3R5Q8WYR1 880 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 HCFC1R1Q9NWW0 138 aa16.96■□□□□ 0.31
IFT20-216ENST00000588477 SMG5Q9UPR3 1016 aaKnown RBP16.96■□□□□ 0.31
IFT20-216ENST00000588477 SPTBN2O15020 2390 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 CASTOR2A6NHX0 329 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 PRR5-ARHGAP8B1AHC4 643 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 TBX3O15119 743 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 ADAM12O43184 909 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 LILRB5O75023 590 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 KIF4AO95239 1232 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 TARSP26639 723 aaKnown RBP16.95■□□□□ 0.3
IFT20-216ENST00000588477 PSMA5P28066 241 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 HOXA9P31269 272 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 ARHGAP8P85298 464 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 TOB2Q14106 344 aaPredicted RBP16.95■□□□□ 0.3
IFT20-216ENST00000588477 AXDND1Q5T1B0 1012 aaPredicted RBP16.95■□□□□ 0.3
IFT20-216ENST00000588477 TPRG1Q6ZUI0 275 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms