RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
CALR-206ENST00000588454 DDX25Q9UHL0 483 aaKnown RBP12.34□□□□□ -0.43
CALR-206ENST00000588454 FBXW11Q9UKB1 542 aa12.34□□□□□ -0.43
CALR-206ENST00000588454 PATJQ8NI35 1801 aa12.34□□□□□ -0.43
CALR-206ENST00000588454 CNOT1A5YKK6 2376 aaKnown RBP12.34□□□□□ -0.43
CALR-206ENST00000588454 PRR5-ARHGAP8B1AHC4 643 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 SLC37A4O43826 429 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 LILRB5O75023 590 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
CALR-206ENST00000588454 YWHABP31946 246 aaKnown RBP12.33□□□□□ -0.44
CALR-206ENST00000588454 NTHL1P78549 312 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 ARHGAP8P85298 464 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 PFKPQ01813 784 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 CSTF1Q05048 431 aaKnown RBP12.33□□□□□ -0.44
CALR-206ENST00000588454 MXD4Q14582 209 aaPredicted RBP12.33□□□□□ -0.44
CALR-206ENST00000588454 EPHA7Q15375 998 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 NPY5RQ15761 445 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 AMHR2Q16671 573 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 RTP2Q5QGT7 225 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 GALNT17Q6IS24 598 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 BLOC1S2Q6QNY1 142 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 PRSS55Q6UWB4 352 aaPredicted RBP12.33□□□□□ -0.44
CALR-206ENST00000588454 HACE1Q8IYU2 909 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 FAM177A1Q8N128 213 aaPredicted RBP12.33□□□□□ -0.44
CALR-206ENST00000588454 DAGLBQ8NCG7 672 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 FGF13Q92913 245 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 CLDN23Q96B33 292 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 JAKMIP1Q96N16 626 aaKnown RBP12.33□□□□□ -0.44
CALR-206ENST00000588454 NELL2Q99435 816 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 CLSTN3Q9BQT9 956 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 APOL6Q9BWW8 343 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 SLKQ9H2G2 1235 aaPredicted RBP12.33□□□□□ -0.44
CALR-206ENST00000588454 ZSCAN32Q9NX65 697 aa12.33□□□□□ -0.44
CALR-206ENST00000588454 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 ZMYM2Q9UBW7 1377 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 INO80B-WBP1J3KQ70 363 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 ZBTB39O15060 712 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 TADA2AO75478 443 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 POU2F2P09086 479 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 ARF4P18085 180 aaPredicted RBP12.32□□□□□ -0.44
CALR-206ENST00000588454 TGM1P22735 817 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 RPS6KB1P23443 525 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 AKAP5P24588 427 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 HOXA9P31269 272 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 CCT2P78371 535 aaKnown RBP12.32□□□□□ -0.44
CALR-206ENST00000588454 MBTD1Q05BQ5 628 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 GRIK3Q13003 919 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 UBXN2BQ14CS0 331 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 INF2Q27J81 1249 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 XKR9Q5GH70 373 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 ZBTB41Q5SVQ8 909 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 LNX1Q8TBB1 728 aaPredicted RBP12.32□□□□□ -0.44
CALR-206ENST00000588454 RABGGTAQ92696 567 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 LXNQ9BS40 222 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 TTPALQ9BTX7 342 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 TRIM6Q9C030 488 aaPredicted RBP12.32□□□□□ -0.44
CALR-206ENST00000588454 EPC1Q9H2F5 836 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 NXF3Q9H4D5 531 aaKnown RBP12.32□□□□□ -0.44
CALR-206ENST00000588454 NCOA5Q9HCD5 579 aaKnown RBP12.32□□□□□ -0.44
CALR-206ENST00000588454 LTB4R2Q9NPC1 389 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 XPNPEP1Q9NQW7 623 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 BMP2KQ9NSY1 1161 aaPredicted RBP12.32□□□□□ -0.44
CALR-206ENST00000588454 SNX14Q9Y5W7 946 aa12.32□□□□□ -0.44
CALR-206ENST00000588454 CEP295Q9C0D2 2601 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 A0A1B0GUA9 196 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 TBX3O15119 743 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 TBC1D4O60343 1298 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 CD72P21854 359 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 RPS9P46781 194 aaKnown RBP12.31□□□□□ -0.44
CALR-206ENST00000588454 SSRP1Q08945 709 aaKnown RBP12.31□□□□□ -0.44
CALR-206ENST00000588454 FZD5Q13467 585 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 TFDP1Q14186 410 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 HSP90AA2PQ14568 343 aaPredicted RBP12.31□□□□□ -0.44
CALR-206ENST00000588454 UVSSAQ2YD98 709 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 PPM1LQ5SGD2 360 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 LIN9Q5TKA1 542 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 PPP4R3AQ6IN85 833 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 KRT25Q7Z3Z0 450 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 ITFG1Q8TB96 612 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 PIK3R5Q8WYR1 880 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 HAS1Q92839 578 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
CALR-206ENST00000588454 MTRQ99707 1265 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 PAAF1Q9BRP4 392 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 NFKBIZQ9BYH8 718 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 ZSWIM4Q9H7M6 989 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 RGL1Q9NZL6 768 aa12.31□□□□□ -0.44
CALR-206ENST00000588454 SMG5Q9UPR3 1016 aaKnown RBP12.31□□□□□ -0.44
CALR-206ENST00000588454 SF3B1O75533 1304 aaKnown RBP eCLIP12.31□□□□□ -0.447e-8■■■■□ 24.1
CALR-206ENST00000588454 ARID2Q68CP9 1835 aa12.3□□□□□ -0.44
CALR-206ENST00000588454 NCAM2O15394 837 aa12.3□□□□□ -0.44
CALR-206ENST00000588454 CCL16O15467 120 aa12.3□□□□□ -0.44
CALR-206ENST00000588454 XYLBO75191 536 aa12.3□□□□□ -0.44
CALR-206ENST00000588454 SLITRK3O94933 977 aa12.3□□□□□ -0.44
CALR-206ENST00000588454 DEXIO95424 95 aa12.3□□□□□ -0.44
CALR-206ENST00000588454 C8AP07357 584 aa12.3□□□□□ -0.44
CALR-206ENST00000588454 HSPA4P34932 840 aa12.3□□□□□ -0.44
CALR-206ENST00000588454 ARL2P36404 184 aa12.3□□□□□ -0.44
CALR-206ENST00000588454 LMNB2Q03252 620 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms