RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 NR5A1Q13285 461 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 SLC27A1Q6PCB7 646 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 PRSS55Q6UWB4 352 aaPredicted RBP15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 PJA1Q8NG27 643 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 EIF2AK1Q9BQI3 630 aaKnown RBP15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 CLSTN3Q9BQT9 956 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 DDX23Q9BUQ8 820 aaKnown RBP15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 FOXQ1Q9C009 403 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 DPP7Q9UHL4 492 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 CYP46A1Q9Y6A2 500 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 ADAM12O43184 909 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 KIF4AO95239 1232 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 NPTXRO95502 500 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 EDN1P05305 212 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 SP9P0CG40 484 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 FDPSP14324 419 aaKnown RBP15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 STARD6P59095 220 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 NTHL1P78549 312 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 USP41Q3LFD5 358 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 CDCA2Q69YH5 1023 aaPredicted RBP15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 PARM1Q6UWI2 310 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 PPP4R3CPQ6ZMV5 832 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 OTUD6AQ7L8S5 288 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 GLYCTKQ8IVS8 523 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 SLKQ9H2G2 1235 aaPredicted RBP15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 SEMA4AQ9H3S1 761 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 KLK14Q9P0G3 267 aa15.33■□□□□ 0.04
CLPTM1-208ENST00000588274 CACNA1IQ9P0X4 2223 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 MED19A0JLT2 244 aaPredicted RBP15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 DGAT1O75907 488 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 IGFBP6P24592 240 aaPredicted RBP15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 HSP90AA2PQ14568 343 aaPredicted RBP15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 ELMSAN1Q6PJG2 1045 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 POTEHQ6S545 545 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 TPH2Q8IWU9 490 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 SLFN12Q8IYM2 578 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 SUMF1Q8NBK3 374 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 LNX1Q8TBB1 728 aaPredicted RBP15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 PIK3R5Q8WYR1 880 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 COLEC11Q9BWP8 271 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 GPRC5CQ9NQ84 441 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 ANKEF1Q9NU02 776 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 TPCN1Q9ULQ1 816 aa15.32■□□□□ 0.04
CLPTM1-208ENST00000588274 COL4A2P08572 1712 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 SHISA7A6NL88 538 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 PFKFB2O60825 505 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 HOXA9P31269 272 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 GPC5P78333 572 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 TUSC3Q13454 348 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 TFDP1Q14186 410 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 SPECC1Q5M775 1068 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 DCLRE1AQ6PJP8 1040 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 GRASPQ7Z6J2 395 aaPredicted RBP15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 C1orf210Q8IVY1 113 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 HASPINQ8TF76 798 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 BSNDQ8WZ55 320 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 MTMR9Q96QG7 549 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 NAP1L4Q99733 375 aaKnown RBP15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 POLR3FQ9H1D9 316 aaPredicted RBP15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 CDH7Q9ULB5 785 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 SIT1Q9Y3P8 196 aa15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 SF3B1O75533 1304 aaKnown RBP eCLIP15.31■□□□□ 0.04
CLPTM1-208ENST00000588274 A0A087WWV3 80 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 POU2F2P09086 479 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 SPATA31C1P0DKV0 1188 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 FSHRP23945 695 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 CREMQ03060 361 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 MIA3Q5JRA6 1907 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 CPLX2Q6PUV4 134 aaKnown RBP15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 CD300LGQ6UXG3 332 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 KIAA2013Q8IYS2 634 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 FGF13Q92913 245 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 TRIM6Q9C030 488 aaPredicted RBP15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 CCDC113Q9H0I3 377 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 FZD8Q9H461 694 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 PDZD7Q9H5P4 517 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 PIDD1Q9HB75 910 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 PDRG1Q9NUG6 133 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 DLL3Q9NYJ7 618 aa15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 MTF2Q9Y483 593 aaPredicted RBP15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 ZFP37Q9Y6Q3 630 aaPredicted RBP15.3■□□□□ 0.04
CLPTM1-208ENST00000588274 CASTOR2A6NHX0 329 aa15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 USO1O60763 962 aaKnown RBP15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 NR1I2O75469 434 aa15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 CDKL5O76039 1030 aa15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 LARGE1O95461 756 aa15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 HNRNPA1P09651 372 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 FAM187BQ17R55 369 aa15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 RSPO2Q6UXX9 243 aaPredicted RBP15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 DCLK2Q8N568 766 aa15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 ITFG1Q8TB96 612 aa15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 PIGOQ8TEQ8 1089 aa15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 PRIMPOLQ96LW4 560 aa15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 TTPALQ9BTX7 342 aa15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 ZFHX4Q86UP3 3567 aa15.29■□□□□ 0.04
CLPTM1-208ENST00000588274 STK25O00506 426 aa15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 RECQL4O94761 1208 aa15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 C8AP07357 584 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms