RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 FZD1Q9UP38 647 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 UHRF1BP1Q6BDS2 1440 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 CTTNBP2Q8WZ74 1663 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 KIAA0556O60303 1618 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 FANCAO15360 1455 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 PRAMEF4O60810 478 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 RAMP2O60895 175 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 SCAF4O95104 1147 aaKnown RBP5.86□□□□□ -1.47
VMP1-205ENST00000587470 GASTP01350 101 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 LPLP06858 475 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 HSP90B1P14625 803 aaKnown RBP5.86□□□□□ -1.47
VMP1-205ENST00000587470 SMN1Q16637 294 aaKnown RBP5.86□□□□□ -1.47
VMP1-205ENST00000587470 UGT8Q16880 541 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 IQSEC1Q6DN90 963 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 ABHD15Q6UXT9 468 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 RHOUQ7L0Q8 258 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 THNSL2Q86YJ6 484 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 SNX33Q8WV41 574 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 ACAP3Q96P50 834 aa5.86□□□□□ -1.47
VMP1-205ENST00000587470 FAM193BQ96PV7 902 aaPredicted RBP5.86□□□□□ -1.47
VMP1-205ENST00000587470 CDC5LQ99459 802 aaKnown RBP5.86□□□□□ -1.47
VMP1-205ENST00000587470 CPEB1Q9BZB8 566 aaKnown RBP5.86□□□□□ -1.47
VMP1-205ENST00000587470 SLKQ9H2G2 1235 aaPredicted RBP5.86□□□□□ -1.47
VMP1-205ENST00000587470 TOPORSQ9NS56 1045 aaPredicted RBP5.86□□□□□ -1.47
VMP1-205ENST00000587470 FOXN1O15353 648 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 TMEM127O75204 238 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 ITGB1P05556 798 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 KRT4P19013 534 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 NR4A1P22736 598 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 CTSSP25774 331 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 HSD3B2P26439 372 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 ID4P47928 161 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 INHBEP58166 350 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 STRN3Q13033 797 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 FSCN1Q16658 493 aaKnown RBP5.85□□□□□ -1.47
VMP1-205ENST00000587470 LAIR1Q6GTX8 287 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 Q6ZPA2 131 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 GPRIN1Q7Z2K8 1008 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 HDGFL2Q7Z4V5 671 aaPredicted RBP5.85□□□□□ -1.47
VMP1-205ENST00000587470 RPUSD2Q8IZ73 545 aaKnown RBP5.85□□□□□ -1.47
VMP1-205ENST00000587470 CLRN3Q8NCR9 226 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 EAF2Q96CJ1 260 aaPredicted RBP5.85□□□□□ -1.47
VMP1-205ENST00000587470 DCLRE1CQ96SD1 692 aaKnown RBP5.85□□□□□ -1.47
VMP1-205ENST00000587470 NDC1Q9BTX1 674 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 TTPALQ9BTX7 342 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 KCNH6Q9H252 994 aa5.85□□□□□ -1.47
VMP1-205ENST00000587470 EIF2B4Q9UI10 523 aaKnown RBP5.85□□□□□ -1.47
VMP1-205ENST00000587470 SETD1BQ9UPS6 1966 aaKnown RBP5.85□□□□□ -1.47
VMP1-205ENST00000587470 SAMD9Q5K651 1589 aa5.84□□□□□ -1.47
VMP1-205ENST00000587470 TTC37Q6PGP7 1564 aa5.84□□□□□ -1.47
VMP1-205ENST00000587470 ARHGAP35Q9NRY4 1499 aa5.84□□□□□ -1.47
VMP1-205ENST00000587470 PRR5-ARHGAP8B1AHC4 643 aa5.84□□□□□ -1.47
VMP1-205ENST00000587470 LY6G5CQ5SRR4 150 aa5.84□□□□□ -1.47
VMP1-205ENST00000587470 XYLT1Q86Y38 959 aa5.84□□□□□ -1.47
VMP1-205ENST00000587470 UBR7Q8N806 425 aa5.84□□□□□ -1.47
VMP1-205ENST00000587470 RAX2Q96IS3 184 aa5.84□□□□□ -1.47
VMP1-205ENST00000587470 CAAP1Q9H8G2 361 aa5.84□□□□□ -1.47
VMP1-205ENST00000587470 USP35Q9P2H5 1018 aa5.84□□□□□ -1.47
VMP1-205ENST00000587470 APOBEC2Q9Y235 224 aaKnown RBP5.84□□□□□ -1.47
VMP1-205ENST00000587470 DMRT1Q9Y5R6 373 aa5.84□□□□□ -1.47
VMP1-205ENST00000587470 NEO1Q92859 1461 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 FHOD3Q2V2M9 1422 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 AKNAQ7Z591 1439 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 ZMYM3Q14202 1370 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 RPTORQ8N122 1335 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 AHRRA9YTQ3 701 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 B5MCH6 92 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 BRINP1O60477 761 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 ITGA10O75578 1167 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 ABHD16AO95870 558 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 ENPP1P22413 925 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 SOX5P35711 763 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 PTPAQ15257 358 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 TIGD2Q4W5G0 525 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 DRICH1Q6PGQ1 229 aaPredicted RBP5.83□□□□□ -1.48
VMP1-205ENST00000587470 LRRC55Q6ZSA7 311 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 PDZD4Q76G19 769 aaPredicted RBP5.83□□□□□ -1.48
VMP1-205ENST00000587470 LILRA3Q8N6C8 439 aaPredicted RBP5.83□□□□□ -1.48
VMP1-205ENST00000587470 PROKR1Q8TCW9 393 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 SLC46A2Q9BY10 475 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 SPON1Q9HCB6 807 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 GPRC5DQ9NZD1 345 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 ABCA8O94911 1581 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 FER1L4A9Z1Z3 1794 aa5.83□□□□□ -1.48
VMP1-205ENST00000587470 TBKBP1A7MCY6 615 aa5.82□□□□□ -1.48
VMP1-205ENST00000587470 PHF2O75151 1096 aa5.82□□□□□ -1.48
VMP1-205ENST00000587470 LAG3P18627 525 aa5.82□□□□□ -1.48
VMP1-205ENST00000587470 APOBEC3AP31941 199 aaPredicted RBP5.82□□□□□ -1.48
VMP1-205ENST00000587470 CRHR1P34998 444 aa5.82□□□□□ -1.48
VMP1-205ENST00000587470 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.82□□□□□ -1.48
VMP1-205ENST00000587470 PCSK4Q6UW60 755 aa5.82□□□□□ -1.48
VMP1-205ENST00000587470 STRA8Q7Z7C7 330 aa5.82□□□□□ -1.48
VMP1-205ENST00000587470 MLST8Q9BVC4 326 aa5.82□□□□□ -1.48
VMP1-205ENST00000587470 RGS17Q9UGC6 210 aaPredicted RBP5.82□□□□□ -1.48
VMP1-205ENST00000587470 DPP7Q9UHL4 492 aa5.82□□□□□ -1.48
VMP1-205ENST00000587470 TMA7Q9Y2S6 64 aaKnown RBP5.82□□□□□ -1.48
VMP1-205ENST00000587470 HS3ST4Q9Y661 456 aa5.82□□□□□ -1.48
VMP1-205ENST00000587470 ZNF335Q9H4Z2 1342 aaPredicted RBP5.81□□□□□ -1.48
VMP1-205ENST00000587470 EFCAB5A4FU69 1503 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 ARHGEF40Q8TER5 1519 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms