RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 BICD1Q96G01 975 aa18.9■□□□□ 0.62
DNMT1-212ENST00000587197 FGFBP2Q9BYJ0 223 aa18.9■□□□□ 0.62
DNMT1-212ENST00000587197 TMEM206Q9H813 350 aa18.9■□□□□ 0.62
DNMT1-212ENST00000587197 ALG13Q9NP73 1137 aaKnown RBP18.9■□□□□ 0.62
DNMT1-212ENST00000587197 UBE4BO95155 1302 aa18.9■□□□□ 0.62
DNMT1-212ENST00000587197 EYSQ5T1H1 3165 aa18.9■□□□□ 0.62
DNMT1-212ENST00000587197 HNRNPDLO14979 420 aaKnown RBP18.89■□□□□ 0.61
DNMT1-212ENST00000587197 INPPL1O15357 1258 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 MYBP10242 640 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 FGFR1P11362 822 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 ITGA4P13612 1032 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 LAG3P18627 525 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 LIG4P49917 911 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 UBE3AQ05086 875 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 MCL1Q07820 350 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 BMT2Q1RMZ1 405 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 RNF169Q8NCN4 708 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 SPATA20Q8TB22 786 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 ZNF507Q8TCN5 953 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 PABPC5Q96DU9 382 aaKnown RBP18.89■□□□□ 0.61
DNMT1-212ENST00000587197 CASD1Q96PB1 797 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 CDT1Q9H211 546 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 TYW1Q9NV66 732 aaKnown RBP18.89■□□□□ 0.61
DNMT1-212ENST00000587197 GIT1Q9Y2X7 761 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 STYXL1Q9Y6J8 313 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 UNC80Q8N2C7 3258 aa18.89■□□□□ 0.61
DNMT1-212ENST00000587197 CLDN3O15551 220 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 SMC2O95347 1197 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 ITGB1P05556 798 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 KCNA5P22460 613 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 PNOCQ13519 176 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 NOLC1Q14978 699 aaKnown RBP eCLIP18.88■□□□□ 0.61
DNMT1-212ENST00000587197 PUS10Q3MIT2 529 aaKnown RBP18.88■□□□□ 0.61
DNMT1-212ENST00000587197 LEXMQ3ZCV2 418 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 ZNF568Q3ZCX4 644 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 CLLU1OSQ5K130 101 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 SLFN12LQ6IEE8 588 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 GLB1LQ6UWU2 654 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 EP400NLQ6ZTU2 488 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 LRRC43Q8N309 656 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 SPPL3Q8TCT6 385 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 HPS3Q969F9 1004 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 ZBTB45Q96K62 511 aaPredicted RBP18.88■□□□□ 0.61
DNMT1-212ENST00000587197 GSDMAQ96QA5 445 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 TCHPQ9BT92 498 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 GTPBP4Q9BZE4 634 aaKnown RBP18.88■□□□□ 0.61
DNMT1-212ENST00000587197 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 NXF3Q9H4D5 531 aaKnown RBP18.88■□□□□ 0.61
DNMT1-212ENST00000587197 RSAD1Q9HA92 442 aa18.88■□□□□ 0.61
DNMT1-212ENST00000587197 A0A0B4J269 797 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 MEIS3P2A8K0S8 358 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 TRANK1O15050 2925 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 OFD1O75665 1012 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 PRPF6O94906 941 aaKnown RBP18.87■□□□□ 0.61
DNMT1-212ENST00000587197 GRM5P41594 1212 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 SNRPFP62306 86 aaKnown RBP18.87■□□□□ 0.61
DNMT1-212ENST00000587197 KCNA1Q09470 495 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 STK4Q13043 487 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 KYAT1Q16773 422 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 SLC39A4Q6P5W5 647 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 THNSL1Q8IYQ7 743 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 SCFD1Q8WVM8 642 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 POF1BQ8WVV4 589 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 LPPQ93052 612 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 MRPL9Q9BYD2 267 aaKnown RBP18.87■□□□□ 0.61
DNMT1-212ENST00000587197 SLC39A2Q9NP94 309 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 RMND1Q9NWS8 449 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 KANSL3Q9P2N6 904 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 PUF60Q9UHX1 559 aaKnown RBP18.87■□□□□ 0.61
DNMT1-212ENST00000587197 FAM50BQ9Y247 325 aa18.87■□□□□ 0.61
DNMT1-212ENST00000587197 FNDC1Q4ZHG4 1894 aaPredicted RBP18.86■□□□□ 0.61
DNMT1-212ENST00000587197 CARNS1A5YM72 827 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 NOMO2Q5JPE7 1267 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 SYCP3Q8IZU3 236 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 COLGALT1Q8NBJ5 622 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 KIAA0895Q8NCT3 520 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 GLIS3Q8NEA6 775 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 HELQQ8TDG4 1101 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 MICAL1Q8TDZ2 1067 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 CLDND1Q9NY35 253 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 HES2Q9Y543 173 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 PCDHA5Q9Y5H7 936 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 PRUNE2Q8WUY3 3088 aa18.86■□□□□ 0.61
DNMT1-212ENST00000587197 ANKRD63C9JTQ0 380 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 FGF18O76093 207 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 KIF20AO95235 890 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 HOXD13P35453 343 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 PPM1AP35813 382 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 POU5F1Q01860 360 aaKnown RBP18.85■□□□□ 0.61
DNMT1-212ENST00000587197 KRT17Q04695 432 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 PDE12Q6L8Q7 609 aaKnown RBP18.85■□□□□ 0.61
DNMT1-212ENST00000587197 ZBTB33Q86T24 672 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 URGCPQ8TCY9 931 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 SMARCE1Q969G3 411 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 ZNF558Q96NG5 402 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 CCDC94Q9BW85 323 aaPredicted RBP18.85■□□□□ 0.61
DNMT1-212ENST00000587197 HAPLN2Q9GZV7 340 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 GBP3Q9H0R5 595 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 CWH43Q9H720 699 aa18.85■□□□□ 0.61
DNMT1-212ENST00000587197 SNTG2Q9NY99 539 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms