RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 TRAPPC12Q8WVT3 735 aa20.09■□□□□ 0.81
RETREG3-205ENST00000586870 SPIRE2Q8WWL2 714 aa20.09■□□□□ 0.81
RETREG3-205ENST00000586870 UBE2OQ9C0C9 1292 aaKnown RBP20.09■□□□□ 0.81
RETREG3-205ENST00000586870 TRIM10Q9UDY6 481 aa20.09■□□□□ 0.81
RETREG3-205ENST00000586870 DAAM1Q9Y4D1 1078 aa20.09■□□□□ 0.81
RETREG3-205ENST00000586870 SCN10AQ9Y5Y9 1956 aa20.08■□□□□ 0.81
RETREG3-205ENST00000586870 WDR81Q562E7 1941 aa20.08■□□□□ 0.81
RETREG3-205ENST00000586870 RBAK-RBAKDNI3L0D1 243 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 PITPNM1O00562 1244 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 MAPK13O15264 365 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 TADA3O75528 432 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 DGAT1O75907 488 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 UCHL3P15374 230 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 KLRC1P26715 233 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 HOXC8P31273 242 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 RAPGEF1Q13905 1077 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 TDRD12Q587J7 1177 aaKnown RBP20.08■□□□□ 0.8
RETREG3-205ENST00000586870 SH2D3AQ9BRG2 576 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 NTPCRQ9BSD7 190 aaKnown RBP20.08■□□□□ 0.8
RETREG3-205ENST00000586870 IFIH1Q9BYX4 1025 aaKnown RBP20.08■□□□□ 0.8
RETREG3-205ENST00000586870 GPRC5CQ9NQ84 441 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 KCNG1Q9UIX4 513 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 UMODL1Q5DID0 1318 aa20.08■□□□□ 0.8
RETREG3-205ENST00000586870 COL1A2P08123 1366 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 RCCD1A6NED2 376 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 SLC16A4O15374 487 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 PJA2O43164 708 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 KRT13P13646 458 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 MAGEA1P43355 309 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 FMO5P49326 533 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 PPIGQ13427 754 aaKnown RBP eCLIP20.07■□□□□ 0.88e-8■□□□□ 10.3
RETREG3-205ENST00000586870 MTHFD1LQ6UB35 978 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 UBXN4Q92575 508 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 SCLYQ96I15 445 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 LACRTQ9GZZ8 138 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 SIX2Q9NPC8 291 aa20.07■□□□□ 0.8
RETREG3-205ENST00000586870 LUC7LQ9NQ29 371 aaKnown RBP20.07■□□□□ 0.8
RETREG3-205ENST00000586870 BZW2Q9Y6E2 419 aaKnown RBP20.07■□□□□ 0.8
RETREG3-205ENST00000586870 RRP9O43818 475 aaKnown RBP20.06■□□□□ 0.8
RETREG3-205ENST00000586870 CKBP12277 381 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 ACTN1P12814 892 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 CSF2RAP15509 400 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 SELPP16109 830 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 ADAM17P78536 824 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 APBA1Q02410 837 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 BFSP1Q12934 665 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 DMP1Q13316 513 aaPredicted RBP20.06■□□□□ 0.8
RETREG3-205ENST00000586870 MTERF2Q49AM1 385 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 MARCH8Q5T0T0 291 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 INTS8Q75QN2 995 aaKnown RBP20.06■□□□□ 0.8
RETREG3-205ENST00000586870 RPUSD2Q8IZ73 545 aaKnown RBP20.06■□□□□ 0.8
RETREG3-205ENST00000586870 PDCL2Q8N4E4 241 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 METTL13Q8N6R0 699 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 CEP112Q8N8E3 955 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 LRRN4CLQ8ND94 238 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 DHX38Q92620 1227 aaKnown RBP20.06■□□□□ 0.8
RETREG3-205ENST00000586870 SPAG5Q96R06 1193 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 FAM49AQ9H0Q0 323 aaPredicted RBP20.06■□□□□ 0.8
RETREG3-205ENST00000586870 GCNT4Q9P109 453 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.06■□□□□ 0.8
RETREG3-205ENST00000586870 V9GYY5 206 aaPredicted RBP20.06■□□□□ 0.8
RETREG3-205ENST00000586870 ARID2Q68CP9 1835 aa20.06■□□□□ 0.8
RETREG3-205ENST00000586870 MBLAC1A4D2B0 266 aaPredicted RBP20.05■□□□□ 0.8
RETREG3-205ENST00000586870 MAGEB2O15479 319 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 RPLP2P05387 115 aaKnown RBP20.05■□□□□ 0.8
RETREG3-205ENST00000586870 IQCF3P0C7M6 154 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 ABCD1P33897 745 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 NPTX2P47972 431 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 KLHL30Q0D2K2 578 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 ELF2Q15723 593 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 ERCC6LQ2NKX8 1250 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 LRRC8DQ7L1W4 858 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 XXYLT1Q8NBI6 393 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 TMEM161BQ8NDZ6 487 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 SECISBP2LQ93073 1101 aaKnown RBP20.05■□□□□ 0.8
RETREG3-205ENST00000586870 ZBTB10Q96DT7 871 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 GDF15Q99988 308 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 ATP6V0A4Q9HBG4 840 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 KMT5AQ9NQR1 393 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 CYP26B1Q9NR63 512 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 FHOD1Q9Y613 1164 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 CCDC169A6NNP5 214 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 H0YCG3 227 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 ANXA13P27216 316 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 TMOD1P28289 359 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 MCCD1P59942 119 aaPredicted RBP20.05■□□□□ 0.8
RETREG3-205ENST00000586870 TUBB4BP68371 445 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 WHAMMP3Q1A5X7 153 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 ZNF618Q5T7W0 954 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 RUFY4Q6ZNE9 571 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 DNAJB3Q8WWF6 145 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 NIFKQ9BYG3 293 aaKnown RBP20.05■□□□□ 0.8
RETREG3-205ENST00000586870 WNT8AQ9H1J5 351 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 PDCL3Q9H2J4 239 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 TBX20Q9UMR3 447 aa20.05■□□□□ 0.8
RETREG3-205ENST00000586870 M0QZ92 97 aa20.04■□□□□ 0.8
RETREG3-205ENST00000586870 P4HA2O15460 535 aa20.04■□□□□ 0.8
RETREG3-205ENST00000586870 N4BP1O75113 896 aaKnown RBP20.04■□□□□ 0.8
RETREG3-205ENST00000586870 CAND2O75155 1236 aa20.04■□□□□ 0.8
RETREG3-205ENST00000586870 PARNO95453 639 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms