RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 VN1R2Q8NFZ6 395 aa18.4■□□□□ 0.54
CSNK1D-225ENST00000584913 ZNF396Q96N95 335 aaPredicted RBP18.4■□□□□ 0.54
CSNK1D-225ENST00000584913 USP28Q96RU2 1077 aa18.4■□□□□ 0.54
CSNK1D-225ENST00000584913 VN1R3Q9BXE9 311 aa18.4■□□□□ 0.54
CSNK1D-225ENST00000584913 EMILIN2Q9BXX0 1053 aa18.4■□□□□ 0.54
CSNK1D-225ENST00000584913 PARVGQ9HBI0 331 aa18.4■□□□□ 0.54
CSNK1D-225ENST00000584913 MIOSQ9NXC5 875 aa18.4■□□□□ 0.54
CSNK1D-225ENST00000584913 HCFC2Q9Y5Z7 792 aa18.4■□□□□ 0.54
CSNK1D-225ENST00000584913 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 TMEM189-UBE2V1I3L0A0 370 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 ABLIM1O14639 778 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 PTGESO14684 152 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 PER2O15055 1255 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 LILRB3O75022 631 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 CLASP2O75122 1294 aaKnown RBP18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 PPP6R2O75170 966 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 CSPG5O95196 566 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 YEATS4O95619 227 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 CXCL14O95715 111 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 PIGRP01833 764 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 URODP06132 367 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 HSP90AA1P07900 732 aaKnown RBP18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 OR1G1P47890 313 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 ITIH3Q06033 890 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 KARSQ15046 597 aaKnown RBP18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 NAB2Q15742 525 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 KYAT1Q16773 422 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 ZNF568Q3ZCX4 644 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 GPBP1Q86WP2 473 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 GJD3Q8N144 294 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 SUSD6Q92537 303 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 UROC1Q96N76 676 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 REEP2Q9BRK0 252 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 CCDC94Q9BW85 323 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 CDT1Q9H211 546 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 ST6GALNAC4Q9H4F1 302 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 MRPL17Q9NRX2 175 aaKnown RBP18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 SNTG2Q9NY99 539 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 DPP7Q9UHL4 492 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 BARX2Q9UMQ3 279 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 NCOR1O75376 2440 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 MYH11P35749 1972 aa18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 TCF20Q9UGU0 1960 aaKnown RBP18.39■□□□□ 0.53
CSNK1D-225ENST00000584913 SLC16A4O15374 487 aa18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 GLUD2P49448 558 aa18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 YARSP54577 528 aaKnown RBP18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 DSG1Q02413 1049 aa18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 ELAVL2Q12926 359 aaKnown RBP18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 HSP90AA2PQ14568 343 aaPredicted RBP18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 CCDC73Q6ZRK6 1079 aa18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 LINC00301Q8NCQ3 95 aa18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 LRRC15Q8TF66 581 aa18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 NECAB3Q96P71 396 aaPredicted RBP18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 RXFP1Q9HBX9 757 aa18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 CHST7Q9NS84 486 aa18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 SEL1LQ9UBV2 794 aa18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 ADAM28Q9UKQ2 775 aa18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 SF3B1O75533 1304 aaKnown RBP eCLIP18.38■□□□□ 0.53
CSNK1D-225ENST00000584913 TBCAO75347 108 aaKnown RBP18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 LIG1P18858 919 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 MCL1Q07820 350 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 FUT10Q6P4F1 479 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 PDXDC1Q6P996 788 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 ELMSAN1Q6PJG2 1045 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 ALKAL1Q6UXT8 129 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 HAUS6Q7Z4H7 955 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 TMEM87AQ8NBN3 555 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 HDAC7Q8WUI4 952 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 HVCN1Q96D96 273 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 NECTIN4Q96NY8 510 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 PPP1R10Q96QC0 940 aaKnown RBP18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 TSPAN18Q96SJ8 248 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 PLIN2Q99541 437 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 C1QTNF1Q9BXJ1 281 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 RHOBTB2Q9BYZ6 727 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 S1PR5Q9H228 398 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 SLC38A7Q9NVC3 462 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 FNIP2Q9P278 1114 aa18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 PRG3Q9Y2Y8 225 aaPredicted RBP18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 USP15Q9Y4E8 981 aaPredicted RBP18.37■□□□□ 0.53
CSNK1D-225ENST00000584913 BDP1A6H8Y1 2624 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 TRAK2O60296 914 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 FAM13AO94988 1023 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 PAPLNO95428 1278 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 ADH1AP07327 375 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 ZSCAN22P10073 491 aaPredicted RBP18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 KCNE1P15382 129 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 MARCKSP29966 332 aaPredicted RBP18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 MCM6Q14566 821 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 CBX2Q14781 532 aaPredicted RBP18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 NOLC1Q14978 699 aaKnown RBP eCLIP18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 USP41Q3LFD5 358 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 KIAA0319Q5VV43 1072 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 FAM173BQ6P4H8 233 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 CYP26C1Q6V0L0 522 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 SLC22A17Q8WUG5 538 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 EPSTI1Q96J88 318 aa18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 TARS2Q9BW92 718 aaKnown RBP18.36■□□□□ 0.53
CSNK1D-225ENST00000584913 PHF7Q9BWX1 381 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms