RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	SYCE2	Q6PIF2	218 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	ABHD15	Q6UXT9	468 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	NIM1K	Q8IY84	436 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	LCORL	Q8N3X6	602 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	CPEB3	Q8NE35	698 aa	Known RBP	4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	SUPT20H	Q8NEM7	779 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	OR14C36	Q8NHC7	312 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	SNX33	Q8WV41	574 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	CDC5L	Q99459	802 aa	Known RBP	4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	ADAM2	Q99965	735 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	TARS2	Q9BW92	718 aa	Known RBP	4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	TEX101	Q9BY14	249 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	PRDM12	Q9H4Q4	367 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	SPON1	Q9HCB6	807 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	SHROOM2	Q13796	1616 aa		4.17	□□□□□ -1.74
VAPA-208	ENST00000584796	DIP2B	Q9P265	1576 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	TBKBP1	A7MCY6	615 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	MASP2	O00187	686 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	KDM1A	O60341	852 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	PRAMEF4	O60810	478 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	ITGA10	O75578	1167 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	GAST	P01350	101 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	CLEC2L	P0C7M8	214 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	RBP3	P10745	1247 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	SEC24C	P53992	1094 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	SART3	Q15020	963 aa	Known RBP	4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	BMT2	Q1RMZ1	405 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	METRNL	Q641Q3	311 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	OR2W6P	Q8NHA6	318 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	ANO3	Q9BYT9	981 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	PIF1	Q9H611	641 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	GPRC5D	Q9NZD1	345 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	CDY2A	Q9Y6F7	541 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	COX11	Q9Y6N1	276 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	KDM6B	O15054	1643 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	ABCA5	Q8WWZ7	1642 aa		4.16	□□□□□ -1.74
VAPA-208	ENST00000584796	FKBP9	O95302	570 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	SPATA31D3	P0C874	917 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	HKR1	P10072	659 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	CTSS	P25774	331 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	DDX6	P26196	483 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	BLOC1S1	P78537	153 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	GUCY1B3	Q02153	619 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	FOXI1	Q12951	378 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	PRR16	Q569H4	304 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	PITRM1	Q5JRX3	1037 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	ABHD17B	Q5VST6	288 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	EFCAB12	Q6NXP0	572 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	SPATA31D4	Q6ZUB0	917 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	FKBP9P1	Q75LS8	142 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	CMTR2	Q8IYT2	770 aa	Known RBP	4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	AHI1	Q8N157	1196 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	APPBP2	Q92624	585 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	TFAP2C	Q92754	450 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	CEP95	Q96GE4	821 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	NEU1	Q99519	415 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	R3HDML	Q9H3Y0	253 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	EMC7	Q9NPA0	242 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	FANCL	Q9NW38	375 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	FGD5	Q6ZNL6	1462 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	CUX1	P39880	1505 aa		4.15	□□□□□ -1.75
VAPA-208	ENST00000584796	ADCY10	Q96PN6	1610 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	UNC119B	A6NIH7	251 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	SPDEF	O95238	335 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	HLA-DOA	P06340	250 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	EGR2	P11161	476 aa	Predicted RBP	4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	LMO1	P25800	156 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	CD38	P28907	300 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	CRHR1	P34998	444 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	IL2	P60568	153 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	DDB1	Q16531	1140 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	MFSD14B	Q5SR56	506 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	BROX	Q5VW32	411 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	ARMC6	Q6NXE6	501 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	PDZD4	Q76G19	769 aa	Predicted RBP	4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	C11orf74	Q86VG3	221 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	RASSF3	Q86WH2	238 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	DHX37	Q8IY37	1157 aa	Known RBP	4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	RNF169	Q8NCN4	708 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	MDM1	Q8TC05	714 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	ZNF480	Q8WV37	535 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	UBXN4	Q92575	508 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	SLC5A5	Q92911	643 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	PAWR	Q96IZ0	340 aa	Known RBP	4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	KCTD10	Q9H3F6	313 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	ALG13	Q9NP73	1137 aa	Known RBP	4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	ADARB2	Q9NS39	739 aa	Known RBP	4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	KCNG1	Q9UIX4	513 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	PLAA	Q9Y263	795 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	FPGT-TNNI3K	V9GXZ4	949 aa		4.14	□□□□□ -1.75
VAPA-208	ENST00000584796	SYNJ2	O15056	1496 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	ADGRL1	O94910	1474 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	MAGI1	Q96QZ7	1491 aa	Predicted RBP	4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	GSG1L2	A8MUP6	293 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	PJA2	O43164	708 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	FLT3LG	P49771	235 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	SCAP	Q12770	1279 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	TP53BP2	Q13625	1128 aa		4.13	□□□□□ -1.75

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