RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 NCKAP1LP55160 1127 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 TUSC3Q13454 348 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 PTPN14Q15678 1187 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 ZRSR1Q15695 479 aaKnown RBP10.87□□□□□ -0.67
SKA2-208ENST00000583927 NAB2Q15742 525 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 EEF1DP3Q658K8 133 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 ANKRD54Q6NXT1 300 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 ALKAL1Q6UXT8 129 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 ZPBP2Q6X784 338 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 EP400NLQ6ZTU2 488 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 GJD3Q8N144 294 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 LRRC15Q8TF66 581 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 LARP4BQ92615 738 aaKnown RBP10.87□□□□□ -0.67
SKA2-208ENST00000583927 RAD54LQ92698 747 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 HERC2P3Q9BVR0 1158 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 COLEC11Q9BWP8 271 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 S1PR5Q9H228 398 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 POLD4Q9HCU8 107 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 CHST7Q9NS84 486 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 DZANK1Q9NVP4 752 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 SNTG2Q9NY99 539 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 PARP2Q9UGN5 583 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 ADAM28Q9UKQ2 775 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 HCFC2Q9Y5Z7 792 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 DOCK6Q96HP0 2047 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.86□□□□□ -0.67
SKA2-208ENST00000583927 TMEM189-UBE2V1I3L0A0 370 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 SLC16A4O15374 487 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 CLASP2O75122 1294 aaKnown RBP10.86□□□□□ -0.67
SKA2-208ENST00000583927 TOM1L1O75674 476 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 CSPG5O95196 566 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 PAPLNO95428 1278 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 SSBP05455 408 aaKnown RBP eCLIP10.86□□□□□ -0.67
SKA2-208ENST00000583927 MCF2P10911 925 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 OR1G1P47890 313 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 DSG1Q02413 1049 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 ITIH3Q06033 890 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 KARSQ15046 597 aaKnown RBP10.86□□□□□ -0.67
SKA2-208ENST00000583927 TMEM132AQ24JP5 1023 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 KIAA0319Q5VV43 1072 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 ATL3Q6DD88 541 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 SYCE2Q6PIF2 218 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 MPZL3Q6UWV2 235 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 SLC22A17Q8WUG5 538 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 EPSTI1Q96J88 318 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 PPP1R10Q96QC0 940 aaKnown RBP10.86□□□□□ -0.67
SKA2-208ENST00000583927 USP28Q96RU2 1077 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 REEP2Q9BRK0 252 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 APOL6Q9BWW8 343 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 EMILIN2Q9BXX0 1053 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 RHOBTB2Q9BYZ6 727 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 CDT1Q9H211 546 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 ST6GALNAC4Q9H4F1 302 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 PARVGQ9HBI0 331 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 RXFP1Q9HBX9 757 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 CD320Q9NPF0 282 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.86□□□□□ -0.67
SKA2-208ENST00000583927 MRPL17Q9NRX2 175 aaKnown RBP10.86□□□□□ -0.67
SKA2-208ENST00000583927 TOPORSQ9NS56 1045 aaPredicted RBP10.86□□□□□ -0.67
SKA2-208ENST00000583927 CCDC39Q9UFE4 941 aa10.86□□□□□ -0.67
SKA2-208ENST00000583927 BARX2Q9UMQ3 279 aaPredicted RBP10.86□□□□□ -0.67
SKA2-208ENST00000583927 SFI1A8K8P3 1242 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 LOC730098B7Z3J9 87 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 PI4K2BG5E9Z4 385 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 PPP6R2O75170 966 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 YEATS4O95619 227 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 PIGRP01833 764 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 MARCKSP29966 332 aaPredicted RBP10.85□□□□□ -0.67
SKA2-208ENST00000583927 TXLNAP40222 546 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 MCL1Q07820 350 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 STRN3Q13033 797 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 MCM6Q14566 821 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 HSP90AA2PQ14568 343 aaPredicted RBP10.85□□□□□ -0.67
SKA2-208ENST00000583927 CBX2Q14781 532 aaPredicted RBP10.85□□□□□ -0.67
SKA2-208ENST00000583927 USP41Q3LFD5 358 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 ZNF568Q3ZCX4 644 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 FUT10Q6P4F1 479 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 FAM173BQ6P4H8 233 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 USP49Q70CQ1 688 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 GPBP1Q86WP2 473 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 KRI1Q8N9T8 703 aaKnown RBP10.85□□□□□ -0.67
SKA2-208ENST00000583927 LINC00301Q8NCQ3 95 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 HDAC7Q8WUI4 952 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 UROC1Q96N76 676 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 FIZ1Q96SL8 496 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 PLIN2Q99541 437 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 CCDC94Q9BW85 323 aaPredicted RBP10.85□□□□□ -0.67
SKA2-208ENST00000583927 TARS2Q9BW92 718 aaKnown RBP10.85□□□□□ -0.67
SKA2-208ENST00000583927 PHF7Q9BWX1 381 aaPredicted RBP10.85□□□□□ -0.67
SKA2-208ENST00000583927 C1QTNF1Q9BXJ1 281 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 KLK14Q9P0G3 267 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 FNIP2Q9P278 1114 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 SEL1LQ9UBV2 794 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 DPP7Q9UHL4 492 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 PRG3Q9Y2Y8 225 aaPredicted RBP10.85□□□□□ -0.67
SKA2-208ENST00000583927 USP15Q9Y4E8 981 aaPredicted RBP10.85□□□□□ -0.67
SKA2-208ENST00000583927 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.85□□□□□ -0.67
SKA2-208ENST00000583927 WDFY4Q6ZS81 3184 aa10.85□□□□□ -0.67
SKA2-208ENST00000583927 SF3B1O75533 1304 aaKnown RBP eCLIP10.84□□□□□ -0.677e-6■■■■■ 33.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms