RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 XKR9Q5GH70 373 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 BLOC1S2Q6QNY1 142 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 CEP57Q86XR8 500 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 C4orf19Q8IY42 314 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 TRIM22Q8IYM9 498 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 ZBTB44Q8NCP5 570 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 ITFG1Q8TB96 612 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 NELL2Q99435 816 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 KXD1Q9BQD3 176 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 CLSTN3Q9BQT9 956 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 RTKNQ9BST9 563 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 TTPALQ9BTX7 342 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 PHF20Q9BVI0 1012 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 NXF3Q9H4D5 531 aaKnown RBP13.68□□□□□ -0.22
TOP3A-215ENST00000583328 KLK14Q9P0G3 267 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 DOCK8Q8NF50 2099 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 NID2Q14112 1375 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 WDR87Q6ZQQ6 2873 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 EPG5Q9HCE0 2579 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 SF3B1O75533 1304 aaKnown RBP eCLIP13.67□□□□□ -0.228e-6■■■■■ 107
TOP3A-215ENST00000583328 SLC37A4O43826 429 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 MARCH6O60337 910 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 ARF4P18085 180 aaPredicted RBP13.67□□□□□ -0.22
TOP3A-215ENST00000583328 GRIK3Q13003 919 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 HSP90AA2PQ14568 343 aaPredicted RBP13.67□□□□□ -0.22
TOP3A-215ENST00000583328 EPHA7Q15375 998 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 INF2Q27J81 1249 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 RTP2Q5QGT7 225 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 FAM171A1Q5VUB5 890 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 TSSK4Q6SA08 328 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 TPRG1Q6ZUI0 275 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 GSTCDQ8NEC7 633 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 HASPINQ8TF76 798 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 FAM20AQ96MK3 541 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 LXNQ9BS40 222 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 EPC1Q9H2F5 836 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 NCOA5Q9HCD5 579 aaKnown RBP13.67□□□□□ -0.22
TOP3A-215ENST00000583328 RGL1Q9NZL6 768 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 GMEB2Q9UKD1 530 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 VAV3Q9UKW4 847 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 DMXL1Q9Y485 3027 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 DNAH14Q0VDD8 3507 aa13.67□□□□□ -0.22
TOP3A-215ENST00000583328 M0R2N6 131 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 ZBTB39O15060 712 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 LILRB5O75023 590 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 NPTXRO95502 500 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 TARSP26639 723 aaKnown RBP13.66□□□□□ -0.22
TOP3A-215ENST00000583328 PDIA3P30101 505 aaKnown RBP13.66□□□□□ -0.22
TOP3A-215ENST00000583328 HOXA9P31269 272 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 POU5F1BQ06416 359 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 CTTNQ14247 550 aaKnown RBP13.66□□□□□ -0.22
TOP3A-215ENST00000583328 PSMD5Q16401 504 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 AMHR2Q16671 573 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 ZNF852Q6ZMS4 543 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
TOP3A-215ENST00000583328 LNX1Q8TBB1 728 aaPredicted RBP13.66□□□□□ -0.22
TOP3A-215ENST00000583328 PIK3R5Q8WYR1 880 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 CLDN23Q96B33 292 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 DYDC2Q96IM9 177 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 ZSWIM4Q9H7M6 989 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 CACNG4Q9UBN1 327 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 MRPS17Q9Y2R5 130 aaKnown RBP13.66□□□□□ -0.22
TOP3A-215ENST00000583328 ACACBO00763 2458 aa13.66□□□□□ -0.22
TOP3A-215ENST00000583328 WDR81Q562E7 1941 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 CASTOR2A6NHX0 329 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 RPS6KB1P23443 525 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 MBTD1Q05BQ5 628 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 ST3GAL2Q16842 350 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 UVSSAQ2YD98 709 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 PABPC1LQ4VXU2 614 aaKnown RBP13.65□□□□□ -0.22
TOP3A-215ENST00000583328 NCAPH2Q6IBW4 605 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 GALNT17Q6IS24 598 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 SLC27A1Q6PCB7 646 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 KRT25Q7Z3Z0 450 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
TOP3A-215ENST00000583328 TPH2Q8IWU9 490 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 FBXL16Q8N461 479 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 DAGLBQ8NCG7 672 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 SLC7A14Q8TBB6 771 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 ING5Q8WYH8 240 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 NELL1Q92832 810 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 PAAF1Q9BRP4 392 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 KCNMB3Q9NPA1 279 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 XPNPEP1Q9NQW7 623 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 RAB23Q9ULC3 237 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 KCNH3Q9ULD8 1083 aa13.65□□□□□ -0.22
TOP3A-215ENST00000583328 CPLX1O14810 134 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 ADAM12O43184 909 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 B4GALT5O43286 388 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 DEXIO95424 95 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 TGM1P22735 817 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 RPS9P46781 194 aaKnown RBP13.64□□□□□ -0.23
TOP3A-215ENST00000583328 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 ADCY1Q08828 1119 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 TUSC3Q13454 348 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 CAPSQ13938 189 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 AXDND1Q5T1B0 1012 aaPredicted RBP13.64□□□□□ -0.23
TOP3A-215ENST00000583328 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 NPAS3Q8IXF0 933 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 ASAP3Q8TDY4 903 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms