RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 STK36Q9NRP7 1315 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 C1RP00736 705 aa17.94■□□□□ 0.46
SREBF1-221ENST00000583080 SP9P0CG40 484 aa17.94■□□□□ 0.46
SREBF1-221ENST00000583080 SLC27A1Q6PCB7 646 aa17.94■□□□□ 0.46
SREBF1-221ENST00000583080 DCLRE1AQ6PJP8 1040 aa17.94■□□□□ 0.46
SREBF1-221ENST00000583080 HACE1Q8IYU2 909 aa17.94■□□□□ 0.46
SREBF1-221ENST00000583080 FGF14Q92915 247 aa17.94■□□□□ 0.46
SREBF1-221ENST00000583080 POLR3FQ9H1D9 316 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-221ENST00000583080 SEMA4AQ9H3S1 761 aa17.94■□□□□ 0.46
SREBF1-221ENST00000583080 PARP2Q9UGN5 583 aa17.94■□□□□ 0.46
SREBF1-221ENST00000583080 SIT1Q9Y3P8 196 aa17.94■□□□□ 0.46
SREBF1-221ENST00000583080 CACNA1IQ9P0X4 2223 aa17.94■□□□□ 0.46
SREBF1-221ENST00000583080 GPR179Q6PRD1 2367 aa17.94■□□□□ 0.46
SREBF1-221ENST00000583080 ZMYM2Q9UBW7 1377 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 DNAH14Q0VDD8 3507 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 A0A087WWV3 80 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 MED19A0JLT2 244 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-221ENST00000583080 CASTOR2A6NHX0 329 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 DGAT1O75907 488 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 KIF4AO95239 1232 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 FSHRP23945 695 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 POU5F1BQ06416 359 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 NCBP1Q09161 790 aaKnown RBP17.93■□□□□ 0.46
SREBF1-221ENST00000583080 NR5A1Q13285 461 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 HSP90AA2PQ14568 343 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-221ENST00000583080 PARM1Q6UWI2 310 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 GRASPQ7Z6J2 395 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-221ENST00000583080 GPR65Q8IYL9 337 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 SLFN12Q8IYM2 578 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 PJA1Q8NG27 643 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 NAP1L4Q99733 375 aaKnown RBP17.93■□□□□ 0.46
SREBF1-221ENST00000583080 HSD17B14Q9BPX1 270 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 NFKBIZQ9BYH8 718 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 TM6SF1Q9BZW5 370 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 CXCL16Q9H2A7 254 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 GPRC5CQ9NQ84 441 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 PDRG1Q9NUG6 133 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 CEP250Q9BV73 2442 aa17.93■□□□□ 0.46
SREBF1-221ENST00000583080 SF3B1O75533 1304 aaKnown RBP eCLIP17.93■□□□□ 0.465e-7■■■■□ 20.1
SREBF1-221ENST00000583080 A0A1B0GUA9 196 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 WNT7AO00755 349 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 ADAM12O43184 909 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 TADA2AO75478 443 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 CDKL5O76039 1030 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 LYPLA2O95372 231 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 RARRES1P49788 294 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 GPC5P78333 572 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 CREMQ03060 361 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 C1orf210Q8IVY1 113 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 MAML2Q8IZL2 1156 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-221ENST00000583080 TNFRSF25Q93038 417 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 CLSTN3Q9BQT9 956 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 VWA8A3KMH1 1905 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 MIA3Q5JRA6 1907 aa17.92■□□□□ 0.46
SREBF1-221ENST00000583080 TTLL13PA6NNM8 815 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 PTGESO14684 152 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 CCL16O15467 120 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 USO1O60763 962 aaKnown RBP17.91■□□□□ 0.46
SREBF1-221ENST00000583080 BAG4O95429 457 aaKnown RBP17.91■□□□□ 0.46
SREBF1-221ENST00000583080 CTDNEP1O95476 244 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 TUSC3Q13454 348 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 PSMD5Q16401 504 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 ZC3H14Q6PJT7 736 aaKnown RBP17.91■□□□□ 0.46
SREBF1-221ENST00000583080 DCLK2Q8N568 766 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 PIGOQ8TEQ8 1089 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 CCDC43Q96MW1 224 aaKnown RBP17.91■□□□□ 0.46
SREBF1-221ENST00000583080 HINFPQ9BQA5 517 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 ANKEF1Q9NU02 776 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 CDH7Q9ULB5 785 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 TPCN1Q9ULQ1 816 aa17.91■□□□□ 0.46
SREBF1-221ENST00000583080 NCOR2Q9Y618 2525 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 LRRIQ4A6NIV6 560 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 C8AP07357 584 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 XBP1P17861 261 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 STARD6P59095 220 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 SNW1Q13573 536 aaKnown RBP17.9■□□□□ 0.46
SREBF1-221ENST00000583080 LIN9Q5TKA1 542 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 FAM171A1Q5VUB5 890 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 MAEAQ7L5Y9 396 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 CEP57Q86XR8 500 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 LNX1Q8TBB1 728 aaPredicted RBP17.9■□□□□ 0.46
SREBF1-221ENST00000583080 PIK3R5Q8WYR1 880 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 FGF13Q92913 245 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 TTPALQ9BTX7 342 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 ZFP37Q9Y6Q3 630 aaPredicted RBP17.9■□□□□ 0.46
SREBF1-221ENST00000583080 PATJQ8NI35 1801 aa17.9■□□□□ 0.46
SREBF1-221ENST00000583080 PFKFB2O60825 505 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 KRT2P35908 639 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 NAB2Q15742 525 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 CALCRLQ16602 461 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 PPM1LQ5SGD2 360 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 PPP4R3CPQ6ZMV5 832 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 DGLUCYQ7Z3D6 616 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 ITFG1Q8TB96 612 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 KXD1Q9BQD3 176 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 PDZD7Q9H5P4 517 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 TTC12Q9H892 705 aaPredicted RBP17.89■□□□□ 0.45
SREBF1-221ENST00000583080 SNTG2Q9NY99 539 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 ORC3Q9UBD5 711 aaPredicted RBP17.89■□□□□ 0.45
SREBF1-221ENST00000583080 PCDHA12Q9UN75 941 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms