RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 PDE8AO60658 829 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 C1QL1O75973 258 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 FDXRP22570 491 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 ABCG1P45844 678 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 SIM1P81133 766 aaPredicted RBP6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 APBA1Q02410 837 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 SCAPQ12770 1279 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 ZNF169Q14929 603 aaPredicted RBP6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 EGFLAMQ63HQ2 1017 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 ARHGEF25Q86VW2 580 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 UBR7Q8N806 425 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 RNF169Q8NCN4 708 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 SEMA4GQ9NTN9 838 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 POGKQ9P215 609 aa6.3□□□□□ -1.4
SMCHD1-207ENST00000581711 A0A1W2PR48 441 aa6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 GSG1L2A8MUP6 293 aa6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 CDKL5O76039 1030 aa6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 CLEC2LP0C7M8 214 aa6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 POU3F2P20265 443 aaPredicted RBP6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 MXRA7P84157 204 aa6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 METRNLQ641Q3 311 aa6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 ARMC6Q6NXE6 501 aa6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 NEU1Q99519 415 aa6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 OXSMQ9NWU1 459 aa6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 USP18Q9UMW8 372 aa6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 ZMYM3Q14202 1370 aa6.29□□□□□ -1.4
SMCHD1-207ENST00000581711 TBKBP1A7MCY6 615 aa6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 MGST3O14880 152 aa6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 FOSP01100 380 aaPredicted RBP6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 CFIP05156 583 aa6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 PFKMP08237 780 aa6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 ATP2A2P16615 1042 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 THNSL2Q86YJ6 484 aa6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 C9orf106Q8NAJ2 232 aa6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 CHTF18Q8WVB6 975 aa6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 LEO1Q8WVC0 666 aaPredicted RBP6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 TFAP2CQ92754 450 aa6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 SLC29A3Q9BZD2 475 aa6.28□□□□□ -1.4
SMCHD1-207ENST00000581711 ST20-MTHFSA0A0A6YYL1 179 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 LRRC3CA6NJW4 275 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 NRP2O60462 931 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 XPAP23025 273 aaPredicted RBP6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 MASP1P48740 699 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 RARRES1P49788 294 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 MGAT5Q09328 741 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 ZBTB41Q5SVQ8 909 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 LMBR1LQ6UX01 489 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 C1QL2Q7Z5L3 287 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 GAB3Q8WWW8 586 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 FERMT2Q96AC1 680 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 Q96MF0 132 aa6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 CDC5LQ99459 802 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 SLKQ9H2G2 1235 aaPredicted RBP6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 THG1LQ9NWX6 298 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-207ENST00000581711 F2P00734 622 aa6.26□□□□□ -1.41
SMCHD1-207ENST00000581711 CD40P25942 277 aa6.26□□□□□ -1.41
SMCHD1-207ENST00000581711 GPR15P49685 360 aa6.26□□□□□ -1.41
SMCHD1-207ENST00000581711 DSG1Q02413 1049 aa6.26□□□□□ -1.41
SMCHD1-207ENST00000581711 UBE3CQ15386 1083 aa6.26□□□□□ -1.41
SMCHD1-207ENST00000581711 BMT2Q1RMZ1 405 aa6.26□□□□□ -1.41
SMCHD1-207ENST00000581711 GPR149Q86SP6 731 aa6.26□□□□□ -1.41
SMCHD1-207ENST00000581711 RNF180Q86T96 592 aa6.26□□□□□ -1.41
SMCHD1-207ENST00000581711 PPM1KQ8N3J5 372 aa6.26□□□□□ -1.41
SMCHD1-207ENST00000581711 GPR101Q96P66 508 aaPredicted RBP6.26□□□□□ -1.41
SMCHD1-207ENST00000581711 CADPSQ9ULU8 1353 aa6.26□□□□□ -1.41
SMCHD1-207ENST00000581711 GAS7O60861 476 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 ZNF81P51508 661 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 CACNA2D1P54289 1103 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 MAPK7Q13164 816 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 CCDC178Q5BJE1 867 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 Q6ZNX1 250 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 ESPNLQ6ZVH7 1005 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 STRA8Q7Z7C7 330 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 AHI1Q8N157 1196 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 ORAI3Q9BRQ5 295 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 C1QTNF7Q9BXJ2 289 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 FAM126AQ9BYI3 521 aaPredicted RBP6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 ZKSCAN5Q9Y2L8 839 aa6.25□□□□□ -1.41
SMCHD1-207ENST00000581711 SBNO2Q9Y2G9 1366 aa6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 CGB1A6NKQ9 187 aa6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 CLSTN1O94985 981 aa6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 NRG3P56975 720 aa6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 LRRC32Q14392 662 aa6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 AGAP9Q5VTM2 703 aa6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 ZNF366Q8N895 744 aa6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 Q8N9P0 234 aaPredicted RBP6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 ZNF496Q96IT1 587 aaPredicted RBP6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 SPTLC3Q9NUV7 552 aa6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 IFT57Q9NWB7 429 aa6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 FOXJ2Q9P0K8 574 aa6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 ATP11BQ9Y2G3 1177 aa6.24□□□□□ -1.41
SMCHD1-207ENST00000581711 LOC105371045A0A1W2PR82 267 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 LCHNA4D1U4 455 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 ITGA10O75578 1167 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 LTA4HP09960 611 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 ADCYAP1R1P41586 468 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 ID4P47928 161 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 CHN2P52757 468 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms