RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 EDN1P05305 212 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 IL17AQ16552 155 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 USP41Q3LFD5 358 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 DCAF4L1Q3SXM0 396 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 KANK3Q6NY19 840 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 ELMSAN1Q6PJG2 1045 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 TMC5Q6UXY8 1006 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 CYP26C1Q6V0L0 522 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 DTHD1Q6ZMT9 781 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 KCTD17Q8N5Z5 321 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 HDAC7Q8WUI4 952 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 PBXIP1Q96AQ6 731 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 ASIC4Q96FT7 647 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 GPR62Q9BZJ7 368 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 FNIP2Q9P278 1114 aa23.05■■□□□ 1.28
CCDC42-203ENST00000581598 PTGESO14684 152 aa23.04■■□□□ 1.28
CCDC42-203ENST00000581598 RECQL4O94761 1208 aa23.04■■□□□ 1.28
CCDC42-203ENST00000581598 GLUD1P00367 558 aa23.04■■□□□ 1.28
CCDC42-203ENST00000581598 SP100P23497 879 aaPredicted RBP23.04■■□□□ 1.28
CCDC42-203ENST00000581598 ATP2C1P98194 919 aaPredicted RBP23.04■■□□□ 1.28
CCDC42-203ENST00000581598 CREMQ03060 361 aa23.04■■□□□ 1.28
CCDC42-203ENST00000581598 HSP90AA2PQ14568 343 aaPredicted RBP23.04■■□□□ 1.28
CCDC42-203ENST00000581598 TMEM132AQ24JP5 1023 aa23.04■■□□□ 1.28
CCDC42-203ENST00000581598 UBALD2Q8IYN6 164 aa23.04■■□□□ 1.28
CCDC42-203ENST00000581598 TDRD5Q8NAT2 981 aaKnown RBP23.04■■□□□ 1.28
CCDC42-203ENST00000581598 MMTAG2Q9BU76 263 aaKnown RBP23.04■■□□□ 1.28
CCDC42-203ENST00000581598 SNTG2Q9NY99 539 aa23.04■■□□□ 1.28
CCDC42-203ENST00000581598 SORCS3Q9UPU3 1222 aa23.04■■□□□ 1.28
CCDC42-203ENST00000581598 PHLPP2Q6ZVD8 1323 aa23.04■■□□□ 1.28
CCDC42-203ENST00000581598 THP07101 528 aa23.03■■□□□ 1.28
CCDC42-203ENST00000581598 NAB2Q15742 525 aa23.03■■□□□ 1.28
CCDC42-203ENST00000581598 HYIQ5T013 277 aa23.03■■□□□ 1.28
CCDC42-203ENST00000581598 EEF1DP3Q658K8 133 aa23.03■■□□□ 1.28
CCDC42-203ENST00000581598 APBB1IPQ7Z5R6 666 aaPredicted RBP23.03■■□□□ 1.28
CCDC42-203ENST00000581598 FBXL6Q8N531 539 aa23.03■■□□□ 1.28
CCDC42-203ENST00000581598 KREMEN2Q8NCW0 462 aa23.03■■□□□ 1.28
CCDC42-203ENST00000581598 KIFC3Q9BVG8 833 aa23.03■■□□□ 1.28
CCDC42-203ENST00000581598 TMEM134Q9H6X4 195 aa23.03■■□□□ 1.28
CCDC42-203ENST00000581598 C17orf75Q9HAS0 396 aa23.03■■□□□ 1.28
CCDC42-203ENST00000581598 MAN1C1Q9NR34 630 aa23.03■■□□□ 1.28
CCDC42-203ENST00000581598 ZDBF2Q9HCK1 2354 aa23.03■■□□□ 1.28
CCDC42-203ENST00000581598 KMT2EQ8IZD2 1858 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 TRIP11Q15643 1979 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 SPDYE4A6NLX3 237 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 PP2D1A8MPX8 630 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 E9PMD0 336 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 K7ERI5 159 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 TADA2AO75478 443 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 GJB2P29033 226 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 MTMR3Q13615 1198 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 NT5DC1Q5TFE4 455 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 ATF7IP2Q5U623 682 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 MCTP1Q6DN14 999 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 CCDC149Q6ZUS6 474 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 ZBTB33Q86T24 672 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 DAW1Q8N136 415 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 INTS4Q96HW7 963 aaKnown RBP23.02■■□□□ 1.28
CCDC42-203ENST00000581598 DRC1Q96MC2 740 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 TIPINQ9BVW5 301 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 PLEKHA4Q9H4M7 779 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 POLD4Q9HCU8 107 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 TNFSF13BQ9Y275 285 aa23.02■■□□□ 1.28
CCDC42-203ENST00000581598 SF3B1O75533 1304 aaKnown RBP eCLIP23.02■■□□□ 1.28
CCDC42-203ENST00000581598 PIEZO1Q92508 2521 aa23.02■■□□□ 1.27
CCDC42-203ENST00000581598 LIG1P18858 919 aa23.01■■□□□ 1.27
CCDC42-203ENST00000581598 NPTX2P47972 431 aa23.01■■□□□ 1.27
CCDC42-203ENST00000581598 ARL6IP4Q66PJ3 421 aaKnown RBP23.01■■□□□ 1.27
CCDC42-203ENST00000581598 RINT1Q6NUQ1 792 aa23.01■■□□□ 1.27
CCDC42-203ENST00000581598 C1orf186Q6ZWK4 172 aa23.01■■□□□ 1.27
CCDC42-203ENST00000581598 OTOP3Q7RTS5 596 aa23.01■■□□□ 1.27
CCDC42-203ENST00000581598 SUGP1Q8IWZ8 645 aaKnown RBP23.01■■□□□ 1.27
CCDC42-203ENST00000581598 FEZF2Q8TBJ5 459 aa23.01■■□□□ 1.27
CCDC42-203ENST00000581598 ACSF2Q96CM8 615 aaPredicted RBP23.01■■□□□ 1.27
CCDC42-203ENST00000581598 IPO9Q96P70 1041 aaKnown RBP23.01■■□□□ 1.27
CCDC42-203ENST00000581598 PAAF1Q9BRP4 392 aa23.01■■□□□ 1.27
CCDC42-203ENST00000581598 ARHGAP28Q9P2N2 729 aa23.01■■□□□ 1.27
CCDC42-203ENST00000581598 USP20Q9Y2K6 914 aa23.01■■□□□ 1.27
CCDC42-203ENST00000581598 MYH11P35749 1972 aa23■■□□□ 1.27
CCDC42-203ENST00000581598 H3BQV1 296 aa23■■□□□ 1.27
CCDC42-203ENST00000581598 HIP1RO75146 1068 aa23■■□□□ 1.27
CCDC42-203ENST00000581598 CDC25AP30304 524 aa23■■□□□ 1.27
CCDC42-203ENST00000581598 PEX3P56589 373 aa23■■□□□ 1.27
CCDC42-203ENST00000581598 ELAVL2Q12926 359 aaKnown RBP23■■□□□ 1.27
CCDC42-203ENST00000581598 MAPK7Q13164 816 aa23■■□□□ 1.27
CCDC42-203ENST00000581598 LILRA6Q6PI73 481 aa23■■□□□ 1.27
CCDC42-203ENST00000581598 KCNK18Q7Z418 384 aa23■■□□□ 1.27
CCDC42-203ENST00000581598 ALYREFQ86V81 257 aaKnown RBP23■■□□□ 1.27
CCDC42-203ENST00000581598 RIN2Q8WYP3 895 aaPredicted RBP23■■□□□ 1.27
CCDC42-203ENST00000581598 PRRX2Q99811 253 aa23■■□□□ 1.27
CCDC42-203ENST00000581598 CASTOR2A6NHX0 329 aa22.99■■□□□ 1.27
CCDC42-203ENST00000581598 GUCY2CP25092 1073 aa22.99■■□□□ 1.27
CCDC42-203ENST00000581598 DMP1Q13316 513 aaPredicted RBP22.99■■□□□ 1.27
CCDC42-203ENST00000581598 RABGGTAQ92696 567 aa22.99■■□□□ 1.27
CCDC42-203ENST00000581598 B3GALT6Q96L58 329 aa22.99■■□□□ 1.27
CCDC42-203ENST00000581598 ACO2Q99798 780 aaKnown RBP22.99■■□□□ 1.27
CCDC42-203ENST00000581598 RUSC1Q9BVN2 902 aa22.99■■□□□ 1.27
CCDC42-203ENST00000581598 NT5C3AQ9H0P0 336 aa22.99■■□□□ 1.27
CCDC42-203ENST00000581598 CXCL16Q9H2A7 254 aa22.99■■□□□ 1.27
CCDC42-203ENST00000581598 PTPRHQ9HD43 1115 aa22.99■■□□□ 1.27
CCDC42-203ENST00000581598 ZDHHC7Q9NXF8 308 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms