RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 CCDC77Q9BR77 488 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 NUP85Q9BW27 656 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 NYAP2Q9P242 653 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 CHORDC1Q9UHD1 332 aaPredicted RBP9.12□□□□□ -0.95
RIOK3-204ENST00000581220 MYH11P35749 1972 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 CCDC189A1A4V9 331 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 P4HA2O15460 535 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 LUC7L3O95232 432 aaKnown RBP9.12□□□□□ -0.95
RIOK3-204ENST00000581220 CYP3A4P08684 503 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 DLATP10515 647 aaKnown RBP9.12□□□□□ -0.95
RIOK3-204ENST00000581220 CREB1P16220 341 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 HOXA13P31271 388 aaPredicted RBP9.12□□□□□ -0.95
RIOK3-204ENST00000581220 VAMP7P51809 220 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 STRN3Q13033 797 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 SNX1Q13596 522 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 RNF43Q68DV7 783 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 PPP1R21Q6ZMI0 780 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 SYDE1Q6ZW31 735 aaPredicted RBP9.12□□□□□ -0.95
RIOK3-204ENST00000581220 ASRGL1Q7L266 308 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 OTOP1Q7RTM1 612 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 ARHGEF19Q8IW93 802 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 ZNF653Q96CK0 615 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 SPDL1Q96EA4 605 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 TXLNGQ9NUQ3 528 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 KCND2Q9NZV8 630 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 PRKAG3Q9UGI9 489 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 POLLQ9UGP5 575 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 PNMA3Q9UL41 463 aa9.12□□□□□ -0.95
RIOK3-204ENST00000581220 A8MUI8 341 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 CLDN3O15551 220 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 ATMINO43313 823 aaPredicted RBP9.11□□□□□ -0.95
RIOK3-204ENST00000581220 BBOX1O75936 387 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 ATP5HO75947 161 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 SGPL1O95470 568 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 GAS8O95995 478 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 GCKP35557 465 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 IRX1P78414 480 aaPredicted RBP9.11□□□□□ -0.95
RIOK3-204ENST00000581220 IL9RQ01113 521 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 CCDC15Q0P6D6 951 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 SETDB1Q15047 1291 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 SIX1Q15475 284 aaPredicted RBP9.11□□□□□ -0.95
RIOK3-204ENST00000581220 ZNF568Q3ZCX4 644 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 TRAPPC3LQ5T215 181 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 ERICH1Q86X53 443 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 SPICE1Q8N0Z3 855 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 GRK7Q8WTQ7 553 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 C1orf54Q8WWF1 131 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 SLCO2A1Q92959 643 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 BTBD6Q96KE9 485 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 ZNF570Q96NI8 536 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 POP1Q99575 1024 aaKnown RBP9.11□□□□□ -0.95
RIOK3-204ENST00000581220 PITPNM3Q9BZ71 974 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 ETNK1Q9HBU6 452 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 SLC24A3Q9HC58 644 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 UVRAGQ9P2Y5 699 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 ANAPC5Q9UJX4 755 aa9.11□□□□□ -0.95
RIOK3-204ENST00000581220 CCNL1Q9UK58 526 aaPredicted RBP9.11□□□□□ -0.95
RIOK3-204ENST00000581220 ARHGEF35A5YM69 484 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 FSCN2O14926 492 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 HGSO14964 777 aaPredicted RBP9.1□□□□□ -0.95
RIOK3-204ENST00000581220 ZBTB39O15060 712 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 HIP1RO75146 1068 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 TCEA3O75764 348 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 WFS1O76024 890 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 CYP1A2P05177 515 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 CCNB1P14635 433 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 ATF2P15336 505 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 MUTP22033 750 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 CHKAP35790 457 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 GCLMP48507 274 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 ACVR2BQ13705 512 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 MTFR1Q15390 333 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 KYNUQ16719 465 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 CERKLQ49MI3 558 aaPredicted RBP9.1□□□□□ -0.95
RIOK3-204ENST00000581220 SYDE2Q5VT97 1194 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 CAPRIN2Q6IMN6 1127 aaKnown RBP9.1□□□□□ -0.95
RIOK3-204ENST00000581220 EP400NLQ6ZTU2 488 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 ANKRD35Q8N283 1001 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 MICAL1Q8TDZ2 1067 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 CNKSR1Q969H4 720 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 ANKRD27Q96NW4 1050 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 FIZ1Q96SL8 496 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 PCDHB18PQ96TA0 734 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 TRAIPQ9BWF2 469 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 PCIF1Q9H4Z3 704 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 AAASQ9NRG9 546 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 SLC5A4Q9NY91 659 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 ADAM22Q9P0K1 906 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 CTNNAL1Q9UBT7 734 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 TBK1Q9UHD2 729 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 GTF3C4Q9UKN8 822 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 K7ENM7 598 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 LIN7AO14910 233 aaPredicted RBP9.1□□□□□ -0.95
RIOK3-204ENST00000581220 RIMBP2O15034 1052 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 GAS7O60861 476 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 CDH16O75309 829 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 SKAP2O75563 359 aaPredicted RBP9.1□□□□□ -0.95
RIOK3-204ENST00000581220 UNC5CO95185 931 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 GH1P01241 217 aa9.1□□□□□ -0.95
RIOK3-204ENST00000581220 POTEJP0CG39 1038 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms