RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 HSPA8P11142 646 aaKnown RBP10.85□□□□□ -0.67
MSI2-209ENST00000579483 SNRNP35Q16560 246 aaKnown RBP10.85□□□□□ -0.67
MSI2-209ENST00000579483 ANO4Q32M45 955 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 ILDR1Q86SU0 546 aaPredicted RBP10.85□□□□□ -0.67
MSI2-209ENST00000579483 NOP9Q86U38 636 aaKnown RBP10.85□□□□□ -0.67
MSI2-209ENST00000579483 C11orf70Q9BRQ4 267 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 PLEKHA5Q9HAU0 1116 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 OGTO15294 1046 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 CYP2C8P10632 490 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 KLRC1P26715 233 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 NMT1P30419 496 aaKnown RBP10.85□□□□□ -0.67
MSI2-209ENST00000579483 SHMT1P34896 483 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 PRCPP42785 496 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 MTA1Q13330 715 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 ELOA2Q8IYF1 753 aaPredicted RBP10.85□□□□□ -0.67
MSI2-209ENST00000579483 WNK4Q96J92 1243 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 DESI2Q9BSY9 194 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 KIAA1257Q9ULG3 409 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 FAN1Q9Y2M0 1017 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 GAKO14976 1311 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 MAP2K5Q13163 448 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 BTG3Q14201 252 aaPredicted RBP10.85□□□□□ -0.67
MSI2-209ENST00000579483 CRY2Q49AN0 593 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 PDCD6IPQ8WUM4 868 aaKnown RBP10.85□□□□□ -0.67
MSI2-209ENST00000579483 C18orf8Q96DM3 657 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 REEP2Q9BRK0 252 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 TTI1O43156 1089 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 PSMD3O43242 534 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 MX2P20592 715 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 EPHB3P54753 998 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 PKP1Q13835 747 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 GTF2H3Q13889 308 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 MFSD10Q14728 455 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 PLA2G4FQ68DD2 849 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 VSTM4Q8IW00 320 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 ASAP3Q8TDY4 903 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 CAMKK2Q96RR4 588 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 TSSK1BQ9BXA7 367 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 TAF1DQ9H5J8 278 aaPredicted RBP10.85□□□□□ -0.67
MSI2-209ENST00000579483 GJB4Q9NTQ9 266 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 ADAMTS1Q9UHI8 967 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 PCDHA13Q9Y5I0 950 aa10.85□□□□□ -0.67
MSI2-209ENST00000579483 CREB3O43889 395 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 KDM1AO60341 852 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 ATP2C2O75185 946 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 CHEK2O96017 543 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 KRT3P12035 628 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 ALDH5A1P51649 535 aaPredicted RBP10.84□□□□□ -0.67
MSI2-209ENST00000579483 DRAP1Q14919 205 aaPredicted RBP10.84□□□□□ -0.67
MSI2-209ENST00000579483 SLMAPQ14BN4 828 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 BRD3Q15059 726 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 MYLK4Q86YV6 388 aaPredicted RBP10.84□□□□□ -0.67
MSI2-209ENST00000579483 STMN2Q93045 179 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 RILPQ96NA2 401 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 TINF2Q9BSI4 451 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 MAF1Q9H063 256 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 SLC4A7Q9Y6M7 1214 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 THP07101 528 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 CLCN1P35523 988 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 PSEN2P49810 448 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 NME3Q13232 169 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 EFHC1Q5JVL4 640 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 CATSPERGQ6ZRH7 1159 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 ZNF410Q86VK4 478 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 LRRC8AQ8IWT6 810 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 C4orf19Q8IY42 314 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 TBC1D19Q8N5T2 526 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 DPH5Q9H2P9 285 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 A0A087WWV3 80 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 MSH4O15457 936 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 FAM200BP0CF97 657 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 GNL1P36915 607 aaPredicted RBP10.84□□□□□ -0.67
MSI2-209ENST00000579483 CREMQ03060 361 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 HEATR6Q6AI08 1181 aaKnown RBP10.84□□□□□ -0.67
MSI2-209ENST00000579483 CDK5RAP1Q96SZ6 601 aaKnown RBP10.84□□□□□ -0.67
MSI2-209ENST00000579483 SEZ6LQ9BYH1 1024 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 TRIM54Q9BYV2 358 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 DOLKQ9UPQ8 538 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 MED1Q15648 1581 aaPredicted RBP10.84□□□□□ -0.67
MSI2-209ENST00000579483 KIF20BQ96Q89 1820 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 CCDC85CA6NKD9 419 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 CCDC188H7C350 402 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 RRP9O43818 475 aaKnown RBP10.84□□□□□ -0.67
MSI2-209ENST00000579483 COBLO75128 1261 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 XYLBO75191 536 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 B3GAT3O94766 335 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 MSH2P43246 934 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 ACOT2P49753 483 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 Q4G0T1 1027 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 C3orf67Q6ZVT6 689 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 CENPUQ71F23 418 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 B4GALNT4Q76KP1 1039 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 NECAB2Q7Z6G3 386 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 ADAT2Q7Z6V5 191 aaKnown RBP10.84□□□□□ -0.67
MSI2-209ENST00000579483 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.84□□□□□ -0.67
MSI2-209ENST00000579483 AFAP1L1Q8TED9 768 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 BPIFA3Q9BQP9 254 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 NIF3L1Q9GZT8 377 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 SIK2Q9H0K1 926 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 RIOX1Q9H6W3 641 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms