RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, human

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCE1-215	ENST00000578995	MISP3	Q96FF7	219 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	KLHDC7B	Q96G42	594 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SPATA33	Q96N06	139 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NAP1L4	Q99733	375 aa	Known RBP	4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MTG1	Q9BT17	334 aa	Predicted RBP	4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TEKT3	Q9BXF9	490 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	OSBPL7	Q9BZF2	842 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	C11orf49	Q9H6J7	331 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TTC12	Q9H892	705 aa	Predicted RBP	4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	BRMS1	Q9HCU9	246 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PDLIM7	Q9NR12	457 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TBC1D22B	Q9NU19	505 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	GTF2IRD1	Q9UHL9	959 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	RCOR1	Q9UKL0	485 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TBX21	Q9UL17	535 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	VWA8	A3KMH1	1905 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	COL1A2	P08123	1366 aa		4.26	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TRANK1	O15050	2925 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	UMODL1	Q5DID0	1318 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TRIOBP	Q9H2D6	2365 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	IGKV6-21	A0A0C4DH24	114 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	FAM237A	A0A1B0GTK4	181 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CCDC85C	A6NKD9	419 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	FAM170B	A6NMN3	283 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	KBTBD13	C9JR72	458 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995		H3BQV1	296 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995		H3BRB1	525 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ARVCF	O00192	962 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	LAD1	O00515	517 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ZBTB39	O15060	712 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	B4GALT4	O60513	344 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	KPNA6	O60684	536 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	GAS7	O60861	476 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	XYLB	O75191	536 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CABYR	O75952	493 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	C22orf31	O95567	290 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	YEATS4	O95619	227 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TFRC	P02786	760 aa	Known RBP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MYL3	P08590	195 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SMIM10L2A	P0DMW4	78 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SMIM10L2B	P0DMW5	78 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PDIA4	P13667	645 aa	Known RBP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ATP2B1	P20020	1258 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CDC25A	P30304	524 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SFN	P31947	248 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ZNF76	P36508	570 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ATP1A2	P50993	1020 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	JAK3	P52333	1124 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	RTP1	P59025	263 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ZNF200	P98182	395 aa	Predicted RBP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SP4	Q02446	784 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	DNM1	Q05193	864 aa	Known RBP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PTPN11	Q06124	597 aa	Predicted RBP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MGAT3	Q09327	533 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	FAAP100	Q0VG06	881 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	GRB10	Q13322	594 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ITGA7	Q13683	1181 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	BECN1	Q14457	450 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PDIA5	Q14554	519 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	EPHA7	Q15375	998 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	DGKD	Q16760	1214 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	KIAA0753	Q2KHM9	967 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TCTN1	Q2MV58	587 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TRIM60	Q495X7	471 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TMEM119	Q4V9L6	283 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NAALADL2	Q58DX5	795 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CEP135	Q66GS9	1140 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NFRKB	Q6P4R8	1299 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SHC4	Q6S5L8	630 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CLEC17A	Q6ZS10	378 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SPRED2	Q7Z698	418 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NECAB2	Q7Z6G3	386 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	RPAIN	Q86UA6	219 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SERINC5	Q86VE9	423 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CATSPER3	Q86XQ3	398 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	WFDC3	Q8IUB2	231 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	C4orf19	Q8IY42	314 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SLFN12	Q8IYM2	578 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PCSK9	Q8NBP7	692 aa	Known RBP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ATP8B4	Q8TF62	1192 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	LMBR1	Q8WVP7	490 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TRAPPC12	Q8WVT3	735 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	FERMT2	Q96AC1	680 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	DYDC2	Q96IM9	177 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CLIC6	Q96NY7	704 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SDF4	Q9BRK5	362 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	YIPF2	Q9BWQ6	316 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	AP5M1	Q9H0R1	490 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	WNT8A	Q9H1J5	351 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PRO3102	Q9H379	93 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TUT1	Q9H6E5	874 aa	Known RBP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MLXIP	Q9HAP2	919 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	XPNPEP1	Q9NQW7	623 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	DISC1	Q9NRI5	854 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	BLOC1S4	Q9NUP1	217 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	RGL1	Q9NZL6	768 aa		4.25	□□□□□ -1.73

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