RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 PURAQ00577 322 aaKnown RBP11.01□□□□□ -0.65
CRLF3-202ENST00000577725 LAMTOR4Q0VGL1 99 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 PTPROQ16827 1216 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 BRDTQ58F21 947 aaPredicted RBP11.01□□□□□ -0.65
CRLF3-202ENST00000577725 TCP11X2Q5H9J9 407 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 MARCH8Q5T0T0 291 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 IER5Q5VY09 327 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 MTHFD1LQ6UB35 978 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 CXCL17Q6UXB2 119 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 RUFY4Q6ZNE9 571 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 RHPN2Q8IUC4 686 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 DRC7Q8IY82 874 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 LINC01465Q8N7H1 131 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 LMBR1Q8WVP7 490 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 TCP11Q8WWU5 503 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 PSPC1Q8WXF1 523 aaKnown RBP11.01□□□□□ -0.65
CRLF3-202ENST00000577725 MRPL38Q96DV4 380 aaKnown RBP11.01□□□□□ -0.65
CRLF3-202ENST00000577725 PDLIM2Q96JY6 352 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 NLRP4Q96MN2 994 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 PPP1R9BQ96SB3 815 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 VPS16Q9H269 839 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 PCIF1Q9H4Z3 704 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 LIMA1Q9UHB6 759 aaKnown RBP11.01□□□□□ -0.65
CRLF3-202ENST00000577725 TBX20Q9UMR3 447 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 COL1A2P08123 1366 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 SCN10AQ9Y5Y9 1956 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 HAS3O00219 553 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 STK25O00506 426 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 PDXKO00764 312 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 CBFA2T2O43439 604 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 VTNP04004 478 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 EDN1P05305 212 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 NR2F2P24468 414 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 NAMPTP43490 491 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 CASP4P49662 377 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 FKBP3Q00688 224 aaKnown RBP11□□□□□ -0.65
CRLF3-202ENST00000577725 ADAM9Q13443 819 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 ALCAMQ13740 583 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 EDRF1Q3B7T1 1238 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 CCDC40Q4G0X9 1142 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 CEP135Q66GS9 1140 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 TMC6Q7Z403 805 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 FRMD5Q7Z6J6 570 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 ZC3H3Q8IXZ2 948 aaKnown RBP11□□□□□ -0.65
CRLF3-202ENST00000577725 ZSWIM2Q8NEG5 633 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 BICD1Q96G01 975 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 JPH2Q9BR39 696 aaPredicted RBP11□□□□□ -0.65
CRLF3-202ENST00000577725 MTG1Q9BT17 334 aaPredicted RBP11□□□□□ -0.65
CRLF3-202ENST00000577725 FAM49AQ9H0Q0 323 aaPredicted RBP11□□□□□ -0.65
CRLF3-202ENST00000577725 GBP3Q9H0R5 595 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 ST6GALNAC4Q9H4F1 302 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 AGPAT3Q9NRZ7 376 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 CLDND1Q9NY35 253 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 ARHGAP28Q9P2N2 729 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 HDAC6Q9UBN7 1215 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 TRAF3IP3Q9Y228 551 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 AKT3Q9Y243 479 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 CACNA1HO95180 2353 aa11□□□□□ -0.65
CRLF3-202ENST00000577725 A0A1B0GTH6 734 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 LINC01553A4QN01 128 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 GOLGA8IPA6NC78 632 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 GOLGA8JA6NMD2 632 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 PES1O00541 588 aaKnown RBP10.99□□□□□ -0.65
CRLF3-202ENST00000577725 CETN3O15182 167 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 MAGEB2O15479 319 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 GAS2O43903 313 aaKnown RBP10.99□□□□□ -0.65
CRLF3-202ENST00000577725 FGFR1OPO95684 399 aaKnown RBP10.99□□□□□ -0.65
CRLF3-202ENST00000577725 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
CRLF3-202ENST00000577725 NKX3-2P78367 333 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 SPAG1Q07617 926 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 TMEM62Q0P6H9 643 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 PPP2R5AQ15172 486 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 NFRKBQ6P4R8 1299 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 SLC39A4Q6P5W5 647 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 FILIP1Q7Z7B0 1213 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 MAP4K3Q8IVH8 894 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 FAM114A1Q8IWE2 563 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 RNF149Q8NC42 400 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 RETREG2Q8NC44 543 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 FBXO22Q8NEZ5 403 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 ANKRD20A12PQ8NF67 263 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 ASIC4Q96FT7 647 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 MRFAP1L1Q96HT8 127 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 CEP63Q96MT8 703 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 RAD9AQ99638 391 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 CBWD1Q9BRT8 395 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 C17orf75Q9HAS0 396 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 GRIN2DO15399 1336 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 NCOR2Q9Y618 2525 aa10.99□□□□□ -0.65
CRLF3-202ENST00000577725 A0A087WZ62 844 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 C17orf102A2RUQ5 167 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 RRN3P2A6NIE6 340 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 TTLL13PA6NNM8 815 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 N4BP3O15049 544 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 TREHO43280 583 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 MBTPS2O43462 519 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 NCK2O43639 380 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 ZEB2O60315 1214 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 CSDE1O75534 798 aaKnown RBP10.98□□□□□ -0.65
CRLF3-202ENST00000577725 AKAP3O75969 853 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms