RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 NEMFO60524 1076 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 ZMYND10O75800 440 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 TXKP42681 527 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 TUSC3Q13454 348 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 HTR4Q13639 388 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 PRSS55Q6UWB4 352 aaPredicted RBP13.08□□□□□ -0.32
CDH8-202ENST00000577228 MAEAQ7L5Y9 396 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 GPR152Q8TDT2 470 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 PRIMPOLQ96LW4 560 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 GPRC5CQ9NQ84 441 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 ARHGEF3Q9NR81 526 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 PRMT7Q9NVM4 692 aaPredicted RBP13.08□□□□□ -0.32
CDH8-202ENST00000577228 CACNG4Q9UBN1 327 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 CASTOR2A6NHX0 329 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 XRCC6P12956 609 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDH8-202ENST00000577228 FDPSP14324 419 aaKnown RBP13.07□□□□□ -0.32
CDH8-202ENST00000577228 FSHRP23945 695 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 RTP2Q5QGT7 225 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 LIN9Q5TKA1 542 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 PPP4R3CPQ6ZMV5 832 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 ZBTB8OSQ8IWT0 167 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 DIS3L2Q8IYB7 885 aaKnown RBP13.07□□□□□ -0.32
CDH8-202ENST00000577228 NECAB1Q8N987 351 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 MCPH1Q8NEM0 835 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 KCNG4Q8TDN1 519 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 HASPINQ8TF76 798 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 PAAF1Q9BRP4 392 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 TTPALQ9BTX7 342 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 SLC2A4RGQ9NR83 387 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 FBXW11Q9UKB1 542 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 NUMBLQ9Y6R0 609 aa13.07□□□□□ -0.32
CDH8-202ENST00000577228 MTCL1Q9Y4B5 1905 aaKnown RBP13.06□□□□□ -0.32
CDH8-202ENST00000577228 POTEMA6NI47 508 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 BTBD18B2RXH4 712 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 WNT7AO00755 349 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 N4BP3O15049 544 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 KIF4AO95239 1232 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 HNRNPA1P09651 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDH8-202ENST00000577228 FOSBP53539 338 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 TRIM29Q14134 588 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 PSMD5Q16401 504 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 SPECC1Q5M775 1068 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 FAM171A1Q5VUB5 890 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 CDCA2Q69YH5 1023 aaPredicted RBP13.06□□□□□ -0.32
CDH8-202ENST00000577228 PHLDB3Q6NSJ2 640 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 POTEGQ6S5H5 508 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 CEP57Q86XR8 500 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 ST13P5Q8NFI4 369 aaPredicted RBP13.06□□□□□ -0.32
CDH8-202ENST00000577228 PIK3R5Q8WYR1 880 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 GTF3C6Q969F1 213 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 MTMR9Q96QG7 549 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 SEMA4AQ9H3S1 761 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 FZD8Q9H461 694 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 PDZD7Q9H5P4 517 aa13.06□□□□□ -0.32
CDH8-202ENST00000577228 ZFP37Q9Y6Q3 630 aaPredicted RBP13.06□□□□□ -0.32
CDH8-202ENST00000577228 RECQL4O94761 1208 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 LARGE1O95461 756 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 LMNAP02545 664 aaKnown RBP13.05□□□□□ -0.32
CDH8-202ENST00000577228 THP07101 528 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 DCNP07585 359 aaKnown RBP13.05□□□□□ -0.32
CDH8-202ENST00000577228 SPATA31C1P0DKV0 1188 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 ATP2B1P20020 1258 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 ID4P47928 161 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 ANAPC15P60006 121 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 ELAVL2Q12926 359 aaKnown RBP13.05□□□□□ -0.32
CDH8-202ENST00000577228 FAM187BQ17R55 369 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 PPM1LQ5SGD2 360 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 DCLRE1AQ6PJP8 1040 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 GRASPQ7Z6J2 395 aaPredicted RBP13.05□□□□□ -0.32
CDH8-202ENST00000577228 NSUN7Q8NE18 718 aaKnown RBP13.05□□□□□ -0.32
CDH8-202ENST00000577228 CLSTN3Q9BQT9 956 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 C2orf40Q9H1Z8 148 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 TMEM60Q9H2L4 133 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 TUFT1Q9NNX1 390 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 SNTG2Q9NY99 539 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 CDH7Q9ULB5 785 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 SIT1Q9Y3P8 196 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 R4GN57 208 aa13.05□□□□□ -0.32
CDH8-202ENST00000577228 TTLL13PA6NNM8 815 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 PTGESO14684 152 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 CCL16O15467 120 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 XYLBO75191 536 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 PRKCBP05771 671 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 C8AP07357 584 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 LIG1P18858 919 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 HOXA9P31269 272 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 NTHL1P78549 312 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 PRPF4BQ13523 1007 aaKnown RBP13.04□□□□□ -0.32
CDH8-202ENST00000577228 MAPK6Q16659 721 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 ME3Q16798 604 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 PDXDC1Q6P996 788 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
CDH8-202ENST00000577228 ERMP1Q7Z2K6 904 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 CATSPER3Q86XQ3 398 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 NOSTRINQ8IVI9 506 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 DEPTORQ8TB45 409 aa13.04□□□□□ -0.32
CDH8-202ENST00000577228 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
CDH8-202ENST00000577228 BSNDQ8WZ55 320 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms