RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 TISP43B9A030 160 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 TSPAN1O60635 241 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 EDN1P05305 212 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 CLTAP09496 248 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 ARF4P18085 180 aaPredicted RBP13.51□□□□□ -0.25
TSEN54-204ENST00000577197 ZNF568Q3ZCX4 644 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 DCAF17Q5H9S7 520 aaPredicted RBP13.51□□□□□ -0.25
TSEN54-204ENST00000577197 TCERG1LQ5VWI1 586 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 KRT39Q6A163 491 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 NOTUMQ6P988 496 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 CRELD2Q6UXH1 353 aaPredicted RBP13.51□□□□□ -0.25
TSEN54-204ENST00000577197 RUFY4Q6ZNE9 571 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 CBWD2Q8IUF1 395 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 OR8K1Q8NGG5 319 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 PPP1R13LQ8WUF5 828 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 DNAJB3Q8WWF6 145 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 CELF4Q9BZC1 486 aaKnown RBP13.51□□□□□ -0.25
TSEN54-204ENST00000577197 IKZF4Q9H2S9 585 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 PCIF1Q9H4Z3 704 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 ASB7Q9H672 318 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 CHST12Q9NRB3 414 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 KCND1Q9NSA2 647 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 AGPAT5Q9NUQ2 364 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 CPSF3Q9UKF6 684 aaKnown RBP13.51□□□□□ -0.25
TSEN54-204ENST00000577197 TRPV2Q9Y5S1 764 aa13.51□□□□□ -0.25
TSEN54-204ENST00000577197 ARHGAP6O43182 974 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 B4GALT4O60513 344 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 CD4P01730 458 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 IQCF3P0C7M6 154 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 ANXA13P27216 316 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 MXI1P50539 228 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 ZNF200P98182 395 aaPredicted RBP13.5□□□□□ -0.25
TSEN54-204ENST00000577197 MYL7Q01449 175 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 KCNMA1Q12791 1236 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 MEA1Q16626 185 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 KIZQ2M2Z5 673 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 TSR1Q2NL82 804 aaKnown RBP13.5□□□□□ -0.25
TSEN54-204ENST00000577197 TRIM60Q495X7 471 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 EPC2Q52LR7 807 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 C1orf220Q5T0J3 134 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 C15orf39Q6ZRI6 1047 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 WDR49Q8IV35 697 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 CACTINQ8WUQ7 758 aaKnown RBP13.5□□□□□ -0.25
TSEN54-204ENST00000577197 FNBP1Q96RU3 617 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 CGRRF1Q99675 332 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 FAM213AQ9BRX8 229 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 TCHPQ9BT92 498 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 HTATIP2Q9BUP3 242 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 TRAIPQ9BWF2 469 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 HAPLN2Q9GZV7 340 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 FAM49AQ9H0Q0 323 aaPredicted RBP13.5□□□□□ -0.25
TSEN54-204ENST00000577197 CDT1Q9H211 546 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 PDZD7Q9H5P4 517 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 PLEKHA5Q9HAU0 1116 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 TRMT13Q9NUP7 481 aaKnown RBP13.5□□□□□ -0.25
TSEN54-204ENST00000577197 RBAKQ9NYW8 714 aaPredicted RBP13.5□□□□□ -0.25
TSEN54-204ENST00000577197 GCNT4Q9P109 453 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 ANKFY1Q9P2R3 1169 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 PLAGL2Q9UPG8 496 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 RALGAPA2Q2PPJ7 1873 aa13.5□□□□□ -0.25
TSEN54-204ENST00000577197 TTC26A0AVF1 554 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 LRRIQ3A6PVS8 624 aaPredicted RBP13.49□□□□□ -0.25
TSEN54-204ENST00000577197 PQBP1O60828 265 aaKnown RBP13.49□□□□□ -0.25
TSEN54-204ENST00000577197 PON1P27169 355 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 HOXA11P31270 313 aaPredicted RBP13.49□□□□□ -0.25
TSEN54-204ENST00000577197 CASP14P31944 242 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 KRT9P35527 623 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 GRM5P41594 1212 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 MATR3P43243 847 aaKnown RBP eCLIP13.49□□□□□ -0.25
TSEN54-204ENST00000577197 TLE2Q04725 743 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 MGAT3Q09327 533 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 LRRC26Q2I0M4 334 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 DPY19L2P1Q6NXN4 242 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 SLC27A1Q6PCB7 646 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 TRIM65Q6PJ69 517 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 CATSPER4Q7RTX7 472 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 TMTC1Q8IUR5 882 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 CCDC155Q8N6L0 562 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 FBXL13Q8NEE6 735 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 CAGE1Q8TC20 777 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 JAKMIP2Q96AA8 810 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 SAAL1Q96ER3 474 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 TRPV6Q9H1D0 765 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 GANQ9H2C0 597 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 FAM124BQ9H5Z6 455 aaPredicted RBP13.49□□□□□ -0.25
TSEN54-204ENST00000577197 ABHD10Q9NUJ1 306 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 ATP11BQ9Y2G3 1177 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 DERAQ9Y315 318 aa13.49□□□□□ -0.25
TSEN54-204ENST00000577197 NOL4O94818 638 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 FXR1P51114 621 aaKnown RBP eCLIP13.48□□□□□ -0.25
TSEN54-204ENST00000577197 CCZ1BP86790 482 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 CCZ1P86791 482 aaPredicted RBP13.48□□□□□ -0.25
TSEN54-204ENST00000577197 PPP3CAQ08209 521 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 BFSP2Q13515 415 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 TRIM71Q2Q1W2 868 aaKnown RBP13.48□□□□□ -0.25
TSEN54-204ENST00000577197 ZACNQ401N2 412 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 KLHDC7AQ5VTJ3 777 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 ENOSF1Q7L5Y1 443 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 EHBP1Q8NDI1 1231 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 LMO3Q8TAP4 145 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms