RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 TSPAN1O60635 241 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 TDP2O95551 362 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 FGD1P98174 961 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 AKAP17AQ02040 695 aaKnown RBP18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 PPP2R5DQ14738 602 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 Q4G0T1 1027 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 PABPC1LQ4VXU2 614 aaKnown RBP18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 RNF20Q5VTR2 975 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 B3GNT9Q6UX72 402 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 EXOC8Q8IYI6 725 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 SLC7A14Q8TBB6 771 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 TBCKQ8TEA7 893 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 ESYT1Q9BSJ8 1104 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 TTPALQ9BTX7 342 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 CSRNP2Q9H175 543 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 NXF3Q9H4D5 531 aaKnown RBP18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 KLK14Q9P0G3 267 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 VPS54Q9P1Q0 977 aa18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 DNMT3BQ9UBC3 853 aaKnown RBP18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 MRPS23Q9Y3D9 190 aaKnown RBP18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 ATRXP46100 2492 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 FRYQ5TBA9 3013 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 ADAM12O43184 909 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 ECI2O75521 394 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 TDGF1P13385 188 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 AXLP30530 894 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 QARSP47897 775 aaKnown RBP18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 COL9A2Q14055 689 aaPredicted RBP18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 HSP90AA2PQ14568 343 aaPredicted RBP18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 PSMD5Q16401 504 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 AXDND1Q5T1B0 1012 aaPredicted RBP18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 FAM171A1Q5VUB5 890 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 PRR23CQ6ZRP0 262 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 HACE1Q8IYU2 909 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 GSTCDQ8NEC7 633 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 LNX1Q8TBB1 728 aaPredicted RBP18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 CCDC51Q96ER9 411 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 PAAF1Q9BRP4 392 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 SLKQ9H2G2 1235 aaPredicted RBP18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 DHX33Q9H6R0 707 aaKnown RBP18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 PARP2Q9UGN5 583 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 SF3B1O75533 1304 aaKnown RBP eCLIP18.13■□□□□ 0.491e-8■■■■■ 60.3
CTDNEP1-211ENST00000575783 MIA3Q5JRA6 1907 aa18.13■□□□□ 0.49
CTDNEP1-211ENST00000575783 INO80B-WBP1J3KQ70 363 aa18.12■□□□□ 0.49
CTDNEP1-211ENST00000575783 EML1O00423 815 aa18.12■□□□□ 0.49
CTDNEP1-211ENST00000575783 ASAP2O43150 1006 aa18.12■□□□□ 0.49
CTDNEP1-211ENST00000575783 LRP3O75074 770 aa18.12■□□□□ 0.49
CTDNEP1-211ENST00000575783 HOXA9P31269 272 aa18.12■□□□□ 0.49
CTDNEP1-211ENST00000575783 RFC5P40937 340 aa18.12■□□□□ 0.49
CTDNEP1-211ENST00000575783 SIM2Q14190 667 aaPredicted RBP18.12■□□□□ 0.49
CTDNEP1-211ENST00000575783 TANGO2Q6ICL3 276 aa18.12■□□□□ 0.49
CTDNEP1-211ENST00000575783 FERMT3Q86UX7 667 aa18.12■□□□□ 0.49
CTDNEP1-211ENST00000575783 CCDC148Q8NFR7 591 aa18.12■□□□□ 0.49
CTDNEP1-211ENST00000575783 KCNH3Q9ULD8 1083 aa18.12■□□□□ 0.49
CTDNEP1-211ENST00000575783 ASPMQ8IZT6 3477 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 SHISA7A6NL88 538 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 RCAN1P53805 252 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 NLRP5P59047 1200 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 GRIK3Q13003 919 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 EMC2Q15006 297 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 CSRP2Q16527 193 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 ADCK5Q3MIX3 580 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 CDR2LQ86X02 465 aaPredicted RBP18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 TCP11Q8WWU5 503 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 PIK3R5Q8WYR1 880 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 CHRDQ9H2X0 955 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 LMAN1LQ9HAT1 526 aa18.11■□□□□ 0.49
CTDNEP1-211ENST00000575783 MYH15Q9Y2K3 1946 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 PATJQ8NI35 1801 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 CYP3A7-CYP3A51PA0A087WV96 503 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 CASTOR2A6NHX0 329 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 MAN2B1O00754 1011 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 DKC1O60832 514 aaKnown RBP eCLIP18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 NPTXRO95502 500 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 CYP3A7P24462 503 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 PTENP60484 403 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 GRM2Q14416 872 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 N4BP2L1Q5TBK1 243 aaPredicted RBP18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 IL31Q6EBC2 164 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 ETNPPLQ8TBG4 499 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 DDX1Q92499 740 aaKnown RBP18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 SLC26A6Q9BXS9 759 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 BRD9Q9H8M2 597 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 GDE1Q9NZC3 331 aa18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 WRAP73Q9P2S5 460 aaPredicted RBP18.1■□□□□ 0.49
CTDNEP1-211ENST00000575783 HRO43593 1189 aa18.09■□□□□ 0.49
CTDNEP1-211ENST00000575783 KIF4AO95239 1232 aa18.09■□□□□ 0.49
CTDNEP1-211ENST00000575783 ARF4P18085 180 aaPredicted RBP18.09■□□□□ 0.49
CTDNEP1-211ENST00000575783 OR1D2P34982 312 aa18.09■□□□□ 0.49
CTDNEP1-211ENST00000575783 CCR3P51677 355 aa18.09■□□□□ 0.49
CTDNEP1-211ENST00000575783 SRSF5Q13243 272 aaKnown RBP18.09■□□□□ 0.49
CTDNEP1-211ENST00000575783 PCBP1Q15365 356 aaKnown RBP eCLIP18.09■□□□□ 0.493e-14■■■■■ 49.4
CTDNEP1-211ENST00000575783 UVSSAQ2YD98 709 aa18.09■□□□□ 0.49
CTDNEP1-211ENST00000575783 RASEFQ8IZ41 740 aa18.09■□□□□ 0.49
CTDNEP1-211ENST00000575783 ZNF687Q8N1G0 1237 aa18.09■□□□□ 0.49
CTDNEP1-211ENST00000575783 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
CTDNEP1-211ENST00000575783 PPME1Q9Y570 386 aa18.09■□□□□ 0.49
CTDNEP1-211ENST00000575783 CHURC1-FNTBB4DL54 471 aa18.08■□□□□ 0.48
CTDNEP1-211ENST00000575783 ZBTB39O15060 712 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms