RNA–Protein interactions for RNA: ENST00000575594.1

ANKFN1-208, Transcript of ankyrin repeat and fibronectin type III domain containing 1, human

TSL 3

Gene ANKFN1, Length 723 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKFN1-208	ENST00000575594	CWH43	Q9H720	699 aa		13.62	□□□□□ -0.23
ANKFN1-208	ENST00000575594	RNF19A	Q9NV58	838 aa		13.62	□□□□□ -0.23
ANKFN1-208	ENST00000575594	PIN4	Q9Y237	131 aa	Known RBP	13.62	□□□□□ -0.23
ANKFN1-208	ENST00000575594	CAPN5	O15484	640 aa	Predicted RBP	13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	DGAT1	O75907	488 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	FGF18	O76093	207 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	XRCC6	P12956	609 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	TEC	P42680	631 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	FOXK2	Q01167	660 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	CENPC	Q03188	943 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	MXD4	Q14582	209 aa	Predicted RBP	13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	CTC1	Q2NKJ3	1217 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	CLLU1OS	Q5K130	101 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	SLC9A9	Q8IVB4	645 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	LRRC43	Q8N309	656 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	MEIOB	Q8N635	442 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	RNF149	Q8NC42	400 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	HELQ	Q8TDG4	1101 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	CCDC43	Q96MW1	224 aa	Known RBP	13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	PUF60	Q9UHX1	559 aa	Known RBP	13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	HRH3	Q9Y5N1	445 aa		13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	TCF20	Q9UGU0	1960 aa	Known RBP	13.61	□□□□□ -0.23
ANKFN1-208	ENST00000575594	ZNF623	O75123	536 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	OR52Z1	P0C646	297 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	SPATA31C1	P0DKV0	1188 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	ATF7	P17544	494 aa	Predicted RBP	13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	U2AF2	P26368	475 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	IRS1	P35568	1242 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	LTBR	P36941	435 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	TRAPPC10	P48553	1259 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	POU5F1B	Q06416	359 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	ADAM15	Q13444	863 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	TTC38	Q5R3I4	469 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	KCNT2	Q6UVM3	1135 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	CATSPER3	Q86XQ3	398 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	ERMN	Q8TAM6	284 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	PIGO	Q8TEQ8	1089 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	RSPH1	Q8WYR4	309 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	MRPL9	Q9BYD2	267 aa	Known RBP	13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	MINDY3	Q9H8M7	445 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	TUFT1	Q9NNX1	390 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	XPNPEP1	Q9NQW7	623 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	TLR9	Q9NR96	1032 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	FAM105A	Q9NUU6	356 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	NOL7	Q9UMY1	257 aa	Known RBP	13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594	KIF3A	Q9Y496	699 aa		13.6	□□□□□ -0.23
ANKFN1-208	ENST00000575594		A0A087WWV3	80 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	CDK2AP1	O14519	115 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	HOXA11	P31270	313 aa	Predicted RBP	13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	PPM1A	P35813	382 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	ALDH7A1	P49419	539 aa	Known RBP	13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	RARRES1	P49788	294 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	RAB27A	P51159	221 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	PLCB3	Q01970	1234 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	KRT17	Q04695	432 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	NCBP1	Q09161	790 aa	Known RBP	13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	TFDP1	Q14186	410 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	LONRF3	Q496Y0	759 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	PDE12	Q6L8Q7	609 aa	Known RBP	13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	CAPN12	Q6ZSI9	719 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	RBM23	Q86U06	439 aa	Known RBP	13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	PGBD4	Q96DM1	585 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	TMX3	Q96JJ7	454 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	ZNF558	Q96NG5	402 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	NACC1	Q96RE7	527 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	AGPAT5	Q9NUQ2	364 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	SPG21	Q9NZD8	308 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	FAM50B	Q9Y247	325 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	LZTS1	Q9Y250	596 aa		13.59	□□□□□ -0.23
ANKFN1-208	ENST00000575594	FAM187A	A6NFU0	413 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	MED24	O75448	989 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	ABL1	P00519	1130 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	ARL2	P36404	184 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	NRIP1	P48552	1158 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	PTEN	P60484	403 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	ERVFC1	P60507	584 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	GLB1L	Q6UWU2	654 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	ADGRD2	Q7Z7M1	963 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	FAM178B	Q8IXR5	827 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	EFHB	Q8N7U6	833 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	C4orf32	Q8N8J7	132 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	MRPS27	Q92552	414 aa	Known RBP	13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	LPP	Q93052	612 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	TLE6	Q9H808	572 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	SEPT3	Q9UH03	358 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	DBR1	Q9UK59	544 aa	Known RBP	13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	PCDHB2	Q9Y5E7	798 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	PCDHGC5	Q9Y5F6	944 aa		13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.58	□□□□□ -0.24
ANKFN1-208	ENST00000575594	INO80B-WBP1	J3KQ70	363 aa		13.57	□□□□□ -0.24
ANKFN1-208	ENST00000575594	LINC01565	O15544	149 aa		13.57	□□□□□ -0.24
ANKFN1-208	ENST00000575594	USO1	O60763	962 aa	Known RBP	13.57	□□□□□ -0.24
ANKFN1-208	ENST00000575594	OFD1	O75665	1012 aa		13.57	□□□□□ -0.24
ANKFN1-208	ENST00000575594	ERLIN2	O94905	339 aa		13.57	□□□□□ -0.24
ANKFN1-208	ENST00000575594	IL9	P15248	144 aa		13.57	□□□□□ -0.24
ANKFN1-208	ENST00000575594	RPA1	P27694	616 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms