RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 ZBTB44Q8NCP5 570 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 RABGGTAQ92696 567 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 NELL1Q92832 810 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 HAS1Q92839 578 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 FGF13Q92913 245 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 CNTNAP3BQ96NU0 1288 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 LXNQ9BS40 222 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 NFKBIZQ9BYH8 718 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 BCO2Q9BYV7 579 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 CNTNAP3Q9BZ76 1288 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 SLKQ9H2G2 1235 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 XPNPEP1Q9NQW7 623 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 SPATA6Q9NWH7 488 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 RGL1Q9NZL6 768 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 FBXW11Q9UKB1 542 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 PCDHGA2Q9Y5H1 932 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 ACACBO00763 2458 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 ZMYM2Q9UBW7 1377 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 A0A1B0GUA9 196 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 INO80B-WBP1J3KQ70 363 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 TBX3O15119 743 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 LAMTOR5O43504 91 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 LILRB5O75023 590 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 TADA2AO75478 443 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 KRT37O76014 449 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 SLITRK3O94933 977 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 TGM1P22735 817 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 HOXA9P31269 272 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 ATXN1P54253 815 aaKnown RBP11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 SPIRE1Q08AE8 756 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 GRIK3Q13003 919 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 FZD5Q13467 585 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 MTSS1LQ765P7 747 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 KRT25Q7Z3Z0 450 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 SKAP1Q86WV1 359 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 TRIM22Q8IYM9 498 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 HACE1Q8IYU2 909 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 LNX1Q8TBB1 728 aaPredicted RBP11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 PIK3R5Q8WYR1 880 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 CLDN23Q96B33 292 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 MTRQ99707 1265 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 PAAF1Q9BRP4 392 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 APOL6Q9BWW8 343 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 TRIM6Q9C030 488 aaPredicted RBP11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 ZSWIM4Q9H7M6 989 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 CFAP47Q6ZTR5 3102 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 DOCK6Q96HP0 2047 aa11.09□□□□□ -0.63
CALCOCO2-227ENST00000575560 SPTBN2O15020 2390 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 B4GALT5O43286 388 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 CDC45O75419 566 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 C8AP07357 584 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 POU2F2P09086 479 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 GCFC2P16383 781 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 CD72P21854 359 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 ARL2P36404 184 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 MAGEA9P43362 315 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 PFKPQ01813 784 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 CSTF1Q05048 431 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 CAPSQ13938 189 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 TOB2Q14106 344 aaPredicted RBP11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 TFDP1Q14186 410 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 CTTNQ14247 550 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 HSP90AA2PQ14568 343 aaPredicted RBP11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 UBXN2BQ14CS0 331 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 PPM1LQ5SGD2 360 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 SLC27A1Q6PCB7 646 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 ITFG1Q8TB96 612 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 ASAP3Q8TDY4 903 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 ATRIPQ8WXE1 791 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 DYDC2Q96IM9 177 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 AIFM3Q96NN9 605 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 NELL2Q99435 816 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 TTPALQ9BTX7 342 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 EPC1Q9H2F5 836 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 LTB4R2Q9NPC1 389 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 ZSCAN32Q9NX65 697 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 KLK14Q9P0G3 267 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 NCDNQ9UBB6 729 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 CACNG4Q9UBN1 327 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 SF3B1O75533 1304 aaKnown RBP eCLIP11.08□□□□□ -0.643e-6■■■□□ 16.8
CALCOCO2-227ENST00000575560 COL4A3Q01955 1670 aa11.08□□□□□ -0.64
CALCOCO2-227ENST00000575560 SHISA7A6NL88 538 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 PRR5-ARHGAP8B1AHC4 643 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 CCL16O15467 120 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 ADAM12O43184 909 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 NPTXRO95502 500 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 PSMA5P28066 241 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 RPS9P46781 194 aaKnown RBP11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 ARHGAP8P85298 464 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 TUSC3Q13454 348 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 UVSSAQ2YD98 709 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 ZBTB41Q5SVQ8 909 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 LIN9Q5TKA1 542 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 FAM171A1Q5VUB5 890 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 NEK8Q86SG6 692 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 CDR2LQ86X02 465 aaPredicted RBP11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 ZNF274Q96GC6 653 aaPredicted RBP11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 HSD17B14Q9BPX1 270 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 PHF20Q9BVI0 1012 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms