RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 NOP58Q9Y2X3 529 aaKnown RBP6.43□□□□□ -1.38
CDC27-216ENST00000574304 MRFAP1Q9Y605 127 aa6.43□□□□□ -1.38
CDC27-216ENST00000574304 FAM171A2A8MVW0 826 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 FZD9O00144 591 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 PCDHGA12O60330 932 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 FZD7O75084 574 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 NDUFS2O75306 463 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 FSHBP01225 129 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 ALOX15P16050 662 aaPredicted RBP6.42□□□□□ -1.38
CDC27-216ENST00000574304 C5AR1P21730 350 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 SLC25A3Q00325 362 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 SP140Q13342 867 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 PCBP2Q15366 365 aaKnown RBP eCLIP6.42□□□□□ -1.38
CDC27-216ENST00000574304 BMT2Q1RMZ1 405 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 EFCAB12Q6NXP0 572 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 DRICH1Q6PGQ1 229 aaPredicted RBP6.42□□□□□ -1.38
CDC27-216ENST00000574304 OR10H5Q8NGA6 315 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 OR2I1PQ8NGU4 316 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.42□□□□□ -1.38
CDC27-216ENST00000574304 SLC35B2Q8TB61 432 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 NRG4Q8WWG1 115 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 TFAP2CQ92754 450 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 DPF2Q92785 391 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 NDC1Q9BTX1 674 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 KRTAP4-11Q9BYQ6 195 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 LDAHQ9H6V9 325 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 HOMER2Q9NSB8 354 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 EIF2B4Q9UI10 523 aaKnown RBP6.42□□□□□ -1.38
CDC27-216ENST00000574304 SIK3Q9Y2K2 1263 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 PCDHGA9Q9Y5G4 932 aaKnown RBP6.42□□□□□ -1.38
CDC27-216ENST00000574304 PCDHGA8Q9Y5G5 932 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 PCDHGA7Q9Y5G6 932 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 PCDHGA6Q9Y5G7 932 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 PCDHGA3Q9Y5H0 932 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 ATRNL1Q5VV63 1379 aa6.42□□□□□ -1.38
CDC27-216ENST00000574304 CXorf49A8MYA2 514 aaPredicted RBP6.41□□□□□ -1.38
CDC27-216ENST00000574304 WNT10BO00744 389 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 TRIM24O15164 1050 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 PJA2O43164 708 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 ZNF202O95125 648 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 PEX11BO96011 259 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 IL2RBP14784 551 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 GUCY1A2P33402 732 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 SLC6A9P48067 706 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 CLRN1P58418 232 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 KRT85P78386 507 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 PTPN21Q16825 1174 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 RNF169Q8NCN4 708 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 ZFP28Q8NHY6 868 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 CPT1CQ8TCG5 803 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 STON2Q8WXE9 905 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 SMAD5Q99717 465 aaKnown RBP6.41□□□□□ -1.38
CDC27-216ENST00000574304 ASPSCR1Q9BZE9 553 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 TMPRSS5Q9H3S3 457 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 MOCS1Q9NZB8 636 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 POGKQ9P215 609 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 SAP30BPQ9UHR5 308 aaKnown RBP6.41□□□□□ -1.38
CDC27-216ENST00000574304 TUBD1Q9UJT1 453 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 AJAP1Q9UKB5 411 aaPredicted RBP6.41□□□□□ -1.38
CDC27-216ENST00000574304 INTUQ9ULD6 942 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 HS3ST3A1Q9Y663 406 aa6.41□□□□□ -1.38
CDC27-216ENST00000574304 NARSO43776 548 aaKnown RBP6.4□□□□□ -1.38
CDC27-216ENST00000574304 RECQL4O94761 1208 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 SCAF4O95104 1147 aaKnown RBP6.4□□□□□ -1.38
CDC27-216ENST00000574304 SNRPA1P09661 255 aaKnown RBP6.4□□□□□ -1.38
CDC27-216ENST00000574304 RAP2AP10114 183 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 MGAT1P26572 445 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 APOBEC3AP31941 199 aaPredicted RBP6.4□□□□□ -1.38
CDC27-216ENST00000574304 WASP42768 502 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 GDF5P43026 501 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 PTTG1IPP53801 180 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 FNDC7Q5VTL7 733 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 AFMIDQ63HM1 303 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 IGFL4Q6B9Z1 124 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 USP51Q70EK9 711 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 PNMA8AQ86V59 439 aaPredicted RBP6.4□□□□□ -1.38
CDC27-216ENST00000574304 TEKT5Q96M29 485 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 FAM193BQ96PV7 902 aaPredicted RBP6.4□□□□□ -1.38
CDC27-216ENST00000574304 C7orf25Q9BPX7 421 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 MANSC1Q9H8J5 431 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 TMEM140Q9NV12 185 aa6.4□□□□□ -1.38
CDC27-216ENST00000574304 TNKSO95271 1327 aa6.4□□□□□ -1.39
CDC27-216ENST00000574304 LOC105371045A0A1W2PR82 267 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 LEFTY2O00292 366 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 SLC16A1P53985 500 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 NHLH2Q02577 135 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 BRDTQ58F21 947 aaPredicted RBP6.39□□□□□ -1.39
CDC27-216ENST00000574304 RRP12Q5JTH9 1297 aaKnown RBP6.39□□□□□ -1.39
CDC27-216ENST00000574304 SYT12Q8IV01 421 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 RPUSD2Q8IZ73 545 aaKnown RBP6.39□□□□□ -1.39
CDC27-216ENST00000574304 ZNF276Q8N554 614 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 SLC16A11Q8NCK7 471 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 CCHCR1Q8TD31 782 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 ZNF483Q8TF39 744 aaPredicted RBP6.39□□□□□ -1.39
CDC27-216ENST00000574304 SLC25A43Q8WUT9 341 aaPredicted RBP6.39□□□□□ -1.39
CDC27-216ENST00000574304 CASKIN2Q8WXE0 1202 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 CYFIP2Q96F07 1278 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 SLC13A1Q9BZW2 595 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 SCAND2PQ9GZW5 306 aaPredicted RBP6.39□□□□□ -1.39
CDC27-216ENST00000574304 SLC2A4RGQ9NR83 387 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms