RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 DZANK1Q9NVP4 752 aa28.65■■■□□ 2.18
NPLOC4-215ENST00000574095 ARHGAP28Q9P2N2 729 aa28.65■■■□□ 2.18
NPLOC4-215ENST00000574095 PHLPP2Q6ZVD8 1323 aa28.65■■■□□ 2.18
NPLOC4-215ENST00000574095 CASTOR2A6NHX0 329 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 SLC16A4O15374 487 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 THP07101 528 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 PDCP20941 246 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 SP100P23497 879 aaPredicted RBP28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 GLUD2P49448 558 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 CLCN4P51793 760 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 GRIN1Q05586 938 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 TUSC3Q13454 348 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 HERC4Q5GLZ8 1057 aaPredicted RBP28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 FUT10Q6P4F1 479 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 KCTD17Q8N5Z5 321 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 ACO2Q99798 780 aaKnown RBP28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 C17orf75Q9HAS0 396 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 ADAM28Q9UKQ2 775 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 TNFSF13BQ9Y275 285 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 SSX2IPQ9Y2D8 614 aa28.64■■■□□ 2.18
NPLOC4-215ENST00000574095 TRIP11Q15643 1979 aa28.64■■■□□ 2.17
NPLOC4-215ENST00000574095 TADA2AO75478 443 aa28.63■■■□□ 2.17
NPLOC4-215ENST00000574095 UBA7P41226 1012 aa28.63■■■□□ 2.17
NPLOC4-215ENST00000574095 HSP90AA2PQ14568 343 aaPredicted RBP28.63■■■□□ 2.17
NPLOC4-215ENST00000574095 KIAA1841Q6NSI8 718 aa28.63■■■□□ 2.17
NPLOC4-215ENST00000574095 FEZF2Q8TBJ5 459 aa28.63■■■□□ 2.17
NPLOC4-215ENST00000574095 FBXL18Q96ME1 805 aa28.63■■■□□ 2.17
NPLOC4-215ENST00000574095 TARS2Q9BW92 718 aaKnown RBP28.63■■■□□ 2.17
NPLOC4-215ENST00000574095 POMKQ9H5K3 350 aa28.63■■■□□ 2.17
NPLOC4-215ENST00000574095 CHST7Q9NS84 486 aa28.63■■■□□ 2.17
NPLOC4-215ENST00000574095 FOXD4L1Q9NU39 408 aa28.63■■■□□ 2.17
NPLOC4-215ENST00000574095 RBM19Q9Y4C8 960 aaKnown RBP28.63■■■□□ 2.17
NPLOC4-215ENST00000574095 NPHP3-ACAD11A0A0J9YXS1 232 aa28.62■■■□□ 2.17
NPLOC4-215ENST00000574095 BMP15O95972 392 aa28.62■■■□□ 2.17
NPLOC4-215ENST00000574095 DSG1Q02413 1049 aa28.62■■■□□ 2.17
NPLOC4-215ENST00000574095 CACNB1Q02641 598 aaPredicted RBP28.62■■■□□ 2.17
NPLOC4-215ENST00000574095 CALML4Q96GE6 196 aa28.62■■■□□ 2.17
NPLOC4-215ENST00000574095 MRPL4Q9BYD3 311 aaKnown RBP28.62■■■□□ 2.17
NPLOC4-215ENST00000574095 PLXNA3P51805 1871 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 TEX28O15482 410 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 SYT1P21579 422 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 NAB2Q15742 525 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 TMC5Q6UXY8 1006 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 APBB1IPQ7Z5R6 666 aaPredicted RBP28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 ZBTB33Q86T24 672 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 CEP120Q8N960 986 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 LRRC15Q8TF66 581 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 HASPINQ8TF76 798 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 NECTIN4Q96NY8 510 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 NTPCRQ9BSD7 190 aaKnown RBP28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 CDT1Q9H211 546 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 RXFP1Q9HBX9 757 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 PTPRHQ9HD43 1115 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 TSHZ2Q9NRE2 1034 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 CLIC4Q9Y696 253 aa28.61■■■□□ 2.17
NPLOC4-215ENST00000574095 SPDYE4A6NLX3 237 aa28.6■■■□□ 2.17
NPLOC4-215ENST00000574095 PRR33A8MZF0 331 aa28.6■■■□□ 2.17
NPLOC4-215ENST00000574095 PLS3P13797 630 aa28.6■■■□□ 2.17
NPLOC4-215ENST00000574095 MTHFRP42898 656 aa28.6■■■□□ 2.17
NPLOC4-215ENST00000574095 OSTNP61366 133 aa28.6■■■□□ 2.17
NPLOC4-215ENST00000574095 DHX8Q14562 1220 aaKnown RBP28.6■■■□□ 2.17
NPLOC4-215ENST00000574095 USP41Q3LFD5 358 aa28.6■■■□□ 2.17
NPLOC4-215ENST00000574095 ARSHQ5FYA8 562 aa28.6■■■□□ 2.17
NPLOC4-215ENST00000574095 GLRA4Q5JXX5 417 aa28.6■■■□□ 2.17
NPLOC4-215ENST00000574095 RIPOR3Q96MK2 946 aa28.6■■■□□ 2.17
NPLOC4-215ENST00000574095 SLC26A4O43511 780 aa28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 ADH1AP07327 375 aa28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 LONP1P36776 959 aaKnown RBP28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 KARSQ15046 597 aaKnown RBP28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 ZNF568Q3ZCX4 644 aa28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 ATAT1Q5SQI0 421 aa28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 FAM173BQ6P4H8 233 aa28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 SPIRE2Q8WWL2 714 aa28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 RIN2Q8WYP3 895 aaPredicted RBP28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 INTS4Q96HW7 963 aaKnown RBP28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 TCHPQ9BT92 498 aa28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 KCND2Q9NZV8 630 aa28.59■■■□□ 2.17
NPLOC4-215ENST00000574095 TRIOO75962 3097 aa28.58■■■□□ 2.17
NPLOC4-215ENST00000574095 KIF4AO95239 1232 aa28.58■■■□□ 2.17
NPLOC4-215ENST00000574095 MYBP10242 640 aa28.58■■■□□ 2.17
NPLOC4-215ENST00000574095 RESTQ13127 1097 aa28.58■■■□□ 2.17
NPLOC4-215ENST00000574095 TMEM161BQ8NDZ6 487 aa28.58■■■□□ 2.17
NPLOC4-215ENST00000574095 ZBTB45Q96K62 511 aaPredicted RBP28.58■■■□□ 2.17
NPLOC4-215ENST00000574095 SFXN1Q9H9B4 322 aa28.58■■■□□ 2.17
NPLOC4-215ENST00000574095 BLOC1S4Q9NUP1 217 aa28.58■■■□□ 2.17
NPLOC4-215ENST00000574095 DAXXQ9UER7 740 aaPredicted RBP28.58■■■□□ 2.17
NPLOC4-215ENST00000574095 KCNG1Q9UIX4 513 aa28.58■■■□□ 2.17
NPLOC4-215ENST00000574095 K7ELQ4 463 aaPredicted RBP28.57■■■□□ 2.16
NPLOC4-215ENST00000574095 GRM5P41594 1212 aa28.57■■■□□ 2.16
NPLOC4-215ENST00000574095 SMTNP53814 917 aa28.57■■■□□ 2.16
NPLOC4-215ENST00000574095 STRN3Q13033 797 aa28.57■■■□□ 2.16
NPLOC4-215ENST00000574095 GPBP1Q86WP2 473 aa28.57■■■□□ 2.16
NPLOC4-215ENST00000574095 GLYCTKQ8IVS8 523 aa28.57■■■□□ 2.16
NPLOC4-215ENST00000574095 RASSF8Q8NHQ8 419 aa28.57■■■□□ 2.16
NPLOC4-215ENST00000574095 EDAQ92838 391 aa28.57■■■□□ 2.16
NPLOC4-215ENST00000574095 CCDC94Q9BW85 323 aaPredicted RBP28.57■■■□□ 2.16
NPLOC4-215ENST00000574095 MAN1C1Q9NR34 630 aa28.57■■■□□ 2.16
NPLOC4-215ENST00000574095 NR2E1Q9Y466 385 aa28.57■■■□□ 2.16
NPLOC4-215ENST00000574095 SF3B1O75533 1304 aaKnown RBP eCLIP28.56■■■□□ 2.168e-7■■■■■ 100.3
NPLOC4-215ENST00000574095 MAPTP10636 758 aaKnown RBP28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms