RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 HES2Q9Y543 173 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 COL6A3P12111 3177 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 SLFN14P0C7P3 912 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 AKAP5P24588 427 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 SCNN1GP51170 649 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 ASIC1P78348 528 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 TUSC3Q13454 348 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 POSTNQ15063 836 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 CCDC85BQ15834 202 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-211ENST00000572174 EEF1DP3Q658K8 133 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 MICAL1Q8TDZ2 1067 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 CCDC47Q96A33 483 aaKnown RBP15.26■□□□□ 0.03
RPAIN-211ENST00000572174 DNAJC19Q96DA6 116 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 IGSF21Q96ID5 467 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 CDCA3Q99618 268 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-211ENST00000572174 COLEC11Q9BWP8 271 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 TRIM9Q9C026 710 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 ENTPD7Q9NQZ7 604 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 SNTG2Q9NY99 539 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 SSX2IPQ9Y2D8 614 aa15.26■□□□□ 0.03
RPAIN-211ENST00000572174 UBE4BO95155 1302 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 TTLL13PA6NNM8 815 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 XPOTO43592 962 aaKnown RBP15.25■□□□□ 0.03
RPAIN-211ENST00000572174 GCNT3O95395 438 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 GALTP07902 379 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 PFKFB1P16118 471 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 SYKP43405 635 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 MCL1Q07820 350 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 DSC1Q08554 894 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 SMC1AQ14683 1233 aaKnown RBP15.25■□□□□ 0.03
RPAIN-211ENST00000572174 ZNF720Q7Z2F6 126 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 DDX53Q86TM3 631 aaKnown RBP15.25■□□□□ 0.03
RPAIN-211ENST00000572174 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.25■□□□□ 0.03
RPAIN-211ENST00000572174 TMEM87AQ8NBN3 555 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 ATXN2LQ8WWM7 1075 aaKnown RBP15.25■□□□□ 0.03
RPAIN-211ENST00000572174 HLA-CQ95604 372 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 ZFP42Q96MM3 310 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 UROC1Q96N76 676 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 ACCSQ96QU6 501 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 TMEM206Q9H813 350 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 PLEKHA5Q9HAU0 1116 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 GDAQ9Y2T3 454 aa15.25■□□□□ 0.03
RPAIN-211ENST00000572174 MTCL1Q9Y4B5 1905 aaKnown RBP15.24■□□□□ 0.03
RPAIN-211ENST00000572174 PVALEFA0A1B0GWK0 134 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 RBAK-RBAKDNI3L0D1 243 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 EDN1P05305 212 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 CLTAP09496 248 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 POU5F1Q01860 360 aaKnown RBP15.24■□□□□ 0.03
RPAIN-211ENST00000572174 ELAVL2Q12926 359 aaKnown RBP15.24■□□□□ 0.03
RPAIN-211ENST00000572174 COASYQ13057 564 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 L1TD1Q5T7N2 865 aaKnown RBP15.24■□□□□ 0.03
RPAIN-211ENST00000572174 KANK3Q6NY19 840 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 TMC7Q7Z402 723 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 ZBTB33Q86T24 672 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 CD302Q8IX05 232 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 COLGALT2Q8IYK4 626 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 SYCP3Q8IZU3 236 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 FIZ1Q96SL8 496 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 C7orf25Q9BPX7 421 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 TCF25Q9BQ70 676 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 HCSTQ9UBK5 93 aa15.24■□□□□ 0.03
RPAIN-211ENST00000572174 FAM237AA0A1B0GTK4 181 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 KIAA0391O15091 583 aaKnown RBP15.23■□□□□ 0.03
RPAIN-211ENST00000572174 OGTO15294 1046 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 EIF3DO15371 548 aaKnown RBP eCLIP15.23■□□□□ 0.03
RPAIN-211ENST00000572174 PPP1R37O75864 691 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 HARSP12081 509 aaKnown RBP15.23■□□□□ 0.03
RPAIN-211ENST00000572174 NMT1P30419 496 aaKnown RBP15.23■□□□□ 0.03
RPAIN-211ENST00000572174 OR1G1P47890 313 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 SLC11A1P49279 550 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 CREMQ03060 361 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 PPP2R3AQ06190 1150 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 TCEAL5Q5H9L2 206 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 UNC13DQ70J99 1090 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 ZNF280BQ86YH2 543 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 PABPC5Q96DU9 382 aaKnown RBP15.23■□□□□ 0.03
RPAIN-211ENST00000572174 DDX27Q96GQ7 796 aaKnown RBP15.23■□□□□ 0.03
RPAIN-211ENST00000572174 MSTO1Q9BUK6 570 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 KLK14Q9P0G3 267 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 DNAJB4Q9UDY4 337 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 FAM50BQ9Y247 325 aa15.23■□□□□ 0.03
RPAIN-211ENST00000572174 SF3B1O75533 1304 aaKnown RBP eCLIP15.22■□□□□ 0.03
RPAIN-211ENST00000572174 A0A1B0GVL5 298 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 ABLIM1O14639 778 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 NRP1O14786 923 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 FSCN2O14926 492 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 DDHD2O94830 711 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 LDHAP00338 332 aaKnown RBP15.22■□□□□ 0.03
RPAIN-211ENST00000572174 URODP06132 367 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 PBX3P40426 434 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 MRPS5P82675 430 aaKnown RBP15.22■□□□□ 0.03
RPAIN-211ENST00000572174 PUS10Q3MIT2 529 aaKnown RBP15.22■□□□□ 0.03
RPAIN-211ENST00000572174 FAM26FQ5R3K3 315 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 PDXDC1Q6P996 788 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 ELMSAN1Q6PJG2 1045 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 GPR65Q8IYL9 337 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 VPS52Q8N1B4 723 aa15.22■□□□□ 0.03
RPAIN-211ENST00000572174 FSIP1Q8NA03 581 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms