RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 ELF2Q15723 593 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 KCNA10Q16322 511 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 GJB7Q6PEY0 223 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 ZNF571Q7Z3V5 609 aaPredicted RBP18.77■□□□□ 0.6
RPAIN-208ENST00000571043 SRGAP1Q7Z6B7 1085 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 VPS36Q86VN1 386 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 CBWD2Q8IUF1 395 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 GPIHBP1Q8IV16 184 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 PCSK9Q8NBP7 692 aaKnown RBP18.77■□□□□ 0.6
RPAIN-208ENST00000571043 ARRDC4Q8NCT1 418 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 DEPTORQ8TB45 409 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 ATP8B4Q8TF62 1192 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 POMGNT1Q8WZA1 660 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 DEFB118Q96PH6 123 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 TSEN34Q9BSV6 310 aaKnown RBP18.77■□□□□ 0.6
RPAIN-208ENST00000571043 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.77■□□□□ 0.6
RPAIN-208ENST00000571043 MCOLN1Q9GZU1 580 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 RNPEPQ9H4A4 650 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 TMEM134Q9H6X4 195 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 STYXL1Q9Y6J8 313 aa18.77■□□□□ 0.6
RPAIN-208ENST00000571043 A0A087X0T9 212 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 MACROD2A1Z1Q3 448 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 GOLGA8IPA6NC78 632 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 GOLGA8JA6NMD2 632 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 HNRNPDLO14979 420 aaKnown RBP18.76■□□□□ 0.59
RPAIN-208ENST00000571043 MYL3P08590 195 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 FAM228BP0C875 321 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 PLCB4Q15147 1175 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 ERCC6LQ2NKX8 1250 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 TRAPPC11Q7Z392 1133 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 GPD1LQ8N335 351 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 ZSWIM2Q8NEG5 633 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 PARD3BQ8TEW8 1205 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 BICD1Q96G01 975 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.76■□□□□ 0.59
RPAIN-208ENST00000571043 ADAMTS1Q9UHI8 967 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 OGDHLQ9ULD0 1010 aa18.76■□□□□ 0.59
RPAIN-208ENST00000571043 V9GYY5 206 aaPredicted RBP18.76■□□□□ 0.59
RPAIN-208ENST00000571043 TRIP12Q14669 1992 aaPredicted RBP18.76■□□□□ 0.59
RPAIN-208ENST00000571043 BTNL10A8MVZ5 291 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 HAS3O00219 553 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 ASGR1P07306 291 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 GJB1P08034 283 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 GCLMP48507 274 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 LIG4P49917 911 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 MXI1P50539 228 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 DRAP1Q14919 205 aaPredicted RBP18.75■□□□□ 0.59
RPAIN-208ENST00000571043 IER5Q5VY09 327 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 RSRC2Q7L4I2 434 aaKnown RBP18.75■□□□□ 0.59
RPAIN-208ENST00000571043 SAAL1Q96ER3 474 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 ALS2CR12Q96Q35 445 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 MTG1Q9BT17 334 aaPredicted RBP18.75■□□□□ 0.59
RPAIN-208ENST00000571043 TMEM117Q9H0C3 514 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 JRKLQ9Y4A0 524 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 EVPLQ92817 2033 aa18.75■□□□□ 0.59
RPAIN-208ENST00000571043 HBP1O60381 514 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 SGPL1O95470 568 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 MARK3P27448 753 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 CYP24A1Q07973 514 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 BMS1Q14692 1282 aaKnown RBP18.74■□□□□ 0.59
RPAIN-208ENST00000571043 NAB2Q15742 525 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 KRT39Q6A163 491 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 SLFN12LQ6IEE8 588 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 TCP11Q8WWU5 503 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 GOLGA1Q92805 767 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 NOX5Q96PH1 765 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 JPH2Q9BR39 696 aaPredicted RBP18.74■□□□□ 0.59
RPAIN-208ENST00000571043 GPR88Q9GZN0 384 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 CRISPLD2Q9H0B8 497 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 TMEM8AQ9HCN3 771 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 NENFQ9UMX5 172 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 COQ4Q9Y3A0 265 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 SAR1BQ9Y6B6 198 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 IGKV6-21A0A0C4DH24 114 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 LRRIQ4A6NIV6 560 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 ZNF233A6NK53 670 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 K7ERI5 159 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 EXTL3O43909 919 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 EVI5O60447 810 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 ATP1A1P05023 1023 aaKnown RBP18.74■□□□□ 0.59
RPAIN-208ENST00000571043 ENOX2Q16206 610 aaKnown RBP18.74■□□□□ 0.59
RPAIN-208ENST00000571043 KIAA0753Q2KHM9 967 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 PHLDB3Q6NSJ2 640 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 CXCL17Q6UXB2 119 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 PDCL2Q8N4E4 241 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 KATNAL1Q9BW62 490 aa18.74■□□□□ 0.59
RPAIN-208ENST00000571043 ARID2Q68CP9 1835 aa18.73■□□□□ 0.59
RPAIN-208ENST00000571043 MOXD2PA6NHM9 499 aa18.73■□□□□ 0.59
RPAIN-208ENST00000571043 LRRIQ3A6PVS8 624 aaPredicted RBP18.73■□□□□ 0.59
RPAIN-208ENST00000571043 MYCNP04198 464 aaPredicted RBP18.73■□□□□ 0.59
RPAIN-208ENST00000571043 PSEN2P49810 448 aa18.73■□□□□ 0.59
RPAIN-208ENST00000571043 EFNA5P52803 228 aa18.73■□□□□ 0.59
RPAIN-208ENST00000571043 ACLYP53396 1101 aa18.73■□□□□ 0.59
RPAIN-208ENST00000571043 CHMP4BP1P59074 171 aa18.73■□□□□ 0.59
RPAIN-208ENST00000571043 MFSD10Q14728 455 aa18.73■□□□□ 0.59
RPAIN-208ENST00000571043 RABGGTAQ92696 567 aa18.73■□□□□ 0.59
RPAIN-208ENST00000571043 NAGPAQ9UK23 515 aa18.73■□□□□ 0.59
RPAIN-208ENST00000571043 INTUQ9ULD6 942 aa18.73■□□□□ 0.59
RPAIN-208ENST00000571043 CAPN6Q9Y6Q1 641 aa18.73■□□□□ 0.59
RPAIN-208ENST00000571043 MYH11P35749 1972 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms