RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 CEP57Q86XR8 500 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 DCLK2Q8N568 766 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 NECAB1Q8N987 351 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 CNNM3Q8NE01 707 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 FGF14Q92915 247 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 CCDC43Q96MW1 224 aaKnown RBP13.4□□□□□ -0.26
CAPN3-220ENST00000569827 PRKD2Q9BZL6 878 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 UBN1Q9NPG3 1134 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 ORC3Q9UBD5 711 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-220ENST00000569827 WNT16Q9UBV4 365 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 ADAM28Q9UKQ2 775 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 POLIQ9UNA4 740 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 SSX2IPQ9Y2D8 614 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 F5P12259 2224 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 KIF26AQ9ULI4 1882 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-220ENST00000569827 STK36Q9NRP7 1315 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 TBX3O15119 743 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 KIF4AO95239 1232 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 EDN1P05305 212 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 AXLP30530 894 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 TXKP42681 527 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 RARRES1P49788 294 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 GRIK3Q13003 919 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 HSP90AA2PQ14568 343 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-220ENST00000569827 MXD4Q14582 209 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-220ENST00000569827 LILRA6Q6PI73 481 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 PARM1Q6UWI2 310 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 EXOC8Q8IYI6 725 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 RMDN1Q96DB5 314 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 CCDC51Q96ER9 411 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 HINFPQ9BQA5 517 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 STK39Q9UEW8 545 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 GIT1Q9Y2X7 761 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 PPME1Q9Y570 386 aa13.39□□□□□ -0.27
CAPN3-220ENST00000569827 TPRP12270 2363 aaKnown RBP13.39□□□□□ -0.27
CAPN3-220ENST00000569827 CACNA1BQ00975 2339 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 NR1I2O75469 434 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 TADA2AO75478 443 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 ZMYND10O75800 440 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 BAG4O95429 457 aaKnown RBP13.38□□□□□ -0.27
CAPN3-220ENST00000569827 LMNAP02545 664 aaKnown RBP13.38□□□□□ -0.27
CAPN3-220ENST00000569827 FDPSP14324 419 aaKnown RBP13.38□□□□□ -0.27
CAPN3-220ENST00000569827 FSHRP23945 695 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 KRT2P35908 639 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 GPC5P78333 572 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 SNW1Q13573 536 aaKnown RBP13.38□□□□□ -0.27
CAPN3-220ENST00000569827 CALCRLQ16602 461 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 FAM171A1Q5VUB5 890 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 SLC27A1Q6PCB7 646 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 ELMSAN1Q6PJG2 1045 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 DCLRE1AQ6PJP8 1040 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 IFNLR1Q8IU57 520 aaPredicted RBP13.38□□□□□ -0.27
CAPN3-220ENST00000569827 SLFN12Q8IYM2 578 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 ING5Q8WYH8 240 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 BSNDQ8WZ55 320 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 TNFRSF25Q93038 417 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 KXD1Q9BQD3 176 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 PLEKHA4Q9H4M7 779 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 TTC12Q9H892 705 aaPredicted RBP13.38□□□□□ -0.27
CAPN3-220ENST00000569827 HCFC1R1Q9NWW0 138 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 ZDHHC7Q9NXF8 308 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 SNTG2Q9NY99 539 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 DLGAP2Q9P1A6 1054 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 FBXW11Q9UKB1 542 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 SIT1Q9Y3P8 196 aa13.38□□□□□ -0.27
CAPN3-220ENST00000569827 ATG2BQ96BY7 2078 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 MED19A0JLT2 244 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-220ENST00000569827 ANHXE9PGG2 379 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 PTGESO14684 152 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 PFKFB2O60825 505 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 DGAT1O75907 488 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 CDKL5O76039 1030 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 RECQL4O94761 1208 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 C8AP07357 584 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 SP9P0CG40 484 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 XBP1P17861 261 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 ATP2B1P20020 1258 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 CD72P21854 359 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 NCBP1Q09161 790 aaKnown RBP13.37□□□□□ -0.27
CAPN3-220ENST00000569827 PSMD5Q16401 504 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 TMEM132AQ24JP5 1023 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 GLRA4Q5JXX5 417 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 EEF1DP3Q658K8 133 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 NOSTRINQ8IVI9 506 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 HACE1Q8IYU2 909 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 ITFG1Q8TB96 612 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 HSD17B14Q9BPX1 270 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 CLSTN3Q9BQT9 956 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 KIFC3Q9BVG8 833 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 TM6SF1Q9BZW5 370 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 TMEM60Q9H2L4 133 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 FNIP2Q9P278 1114 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 DPP7Q9UHL4 492 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 PCDHA12Q9UN75 941 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 GDAQ9Y2T3 454 aa13.37□□□□□ -0.27
CAPN3-220ENST00000569827 MTF2Q9Y483 593 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-220ENST00000569827 COL4A2P08572 1712 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 A0A1B0GUA9 196 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 BTBD18B2RXH4 712 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms