RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PLCG1P19174 1290 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 NDUFA8P51970 172 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 STRN3Q13033 797 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 MAPK7Q13164 816 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 SNW1Q13573 536 aaKnown RBP15.89■□□□□ 0.13
COMMD4-225ENST00000569245 DCAF4L1Q3SXM0 396 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 TPRNQ4KMQ1 711 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 NT5DC1Q5TFE4 455 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 EEF1DP3Q658K8 133 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 LLGL2Q6P1M3 1020 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 USP49Q70CQ1 688 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 GPBP1Q86WP2 473 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 BCL7CQ8WUZ0 217 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-225ENST00000569245 EPSTI1Q96J88 318 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 TMEM134Q9H6X4 195 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 MIOSQ9NXC5 875 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 SNTG2Q9NY99 539 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 BARX2Q9UMQ3 279 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-225ENST00000569245 PHLPP2Q6ZVD8 1323 aa15.89■□□□□ 0.13
COMMD4-225ENST00000569245 BRWD1Q9NSI6 2320 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-225ENST00000569245 C2orf71A6NGG8 1288 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 INPPL1O15357 1258 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 EDN1P05305 212 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 TXLNAP40222 546 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 RBM10P98175 930 aaKnown RBP15.88■□□□□ 0.13
COMMD4-225ENST00000569245 CACNB1Q02641 598 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-225ENST00000569245 MCM6Q14566 821 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 COLGALT2Q8IYK4 626 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 FMR1NBQ8N0W7 255 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-225ENST00000569245 AUTS2Q8WXX7 1259 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 RAD54LQ92698 747 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 PYM1Q9BRP8 204 aaKnown RBP15.88■□□□□ 0.13
COMMD4-225ENST00000569245 TCHPQ9BT92 498 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 COLEC11Q9BWP8 271 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 MRPL4Q9BYD3 311 aaKnown RBP15.88■□□□□ 0.13
COMMD4-225ENST00000569245 ZHX3Q9H4I2 956 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 CLEC1BQ9P126 229 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 STK39Q9UEW8 545 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 CCDC39Q9UFE4 941 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 KCNH3Q9ULD8 1083 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 GDAQ9Y2T3 454 aa15.88■□□□□ 0.13
COMMD4-225ENST00000569245 MUC3AQ02505 3323 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 RECQL4O94761 1208 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 CTSAP10619 480 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 SSTR3P32745 418 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-225ENST00000569245 SYKP43405 635 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 GRIK3Q13003 919 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 SMAD4Q13485 552 aaKnown RBP15.87■□□□□ 0.13
COMMD4-225ENST00000569245 GIT2Q14161 759 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 ARSHQ5FYA8 562 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 ZBTB33Q86T24 672 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 SPIRE2Q8WWL2 714 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 TIGD1Q96MW7 591 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 TARS2Q9BW92 718 aaKnown RBP15.87■□□□□ 0.13
COMMD4-225ENST00000569245 ZBP1Q9H171 429 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 LARSQ9P2J5 1176 aaKnown RBP15.87■□□□□ 0.13
COMMD4-225ENST00000569245 ARHGAP28Q9P2N2 729 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 TNFSF13BQ9Y275 285 aa15.87■□□□□ 0.13
COMMD4-225ENST00000569245 FAM13AO94988 1023 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 ZNF202O95125 648 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 GLP2RO95838 553 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 DSC1Q08554 894 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 ZNF568Q3ZCX4 644 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 RRAGBQ5VZM2 374 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 FAM178BQ8IXR5 827 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 MYCT1Q8N699 235 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 GSTCDQ8NEC7 633 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 VN1R2Q8NFZ6 395 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 RABGGTAQ92696 567 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 SYAP1Q96A49 352 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-225ENST00000569245 MSLNLQ96KJ4 702 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 ACO2Q99798 780 aaKnown RBP15.86■□□□□ 0.13
COMMD4-225ENST00000569245 REEP2Q9BRK0 252 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 NTPCRQ9BSD7 190 aaKnown RBP15.86■□□□□ 0.13
COMMD4-225ENST00000569245 BLOC1S4Q9NUP1 217 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 PLXNA4Q9HCM2 1894 aa15.86■□□□□ 0.13
COMMD4-225ENST00000569245 BDP1A6H8Y1 2624 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 H0YCG3 227 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 C2CD2LO14523 706 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 MBTPS2O43462 519 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 CLASP2O75122 1294 aaKnown RBP15.85■□□□□ 0.13
COMMD4-225ENST00000569245 TBCAO75347 108 aaKnown RBP15.85■□□□□ 0.13
COMMD4-225ENST00000569245 THP07101 528 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 HARSP12081 509 aaKnown RBP15.85■□□□□ 0.13
COMMD4-225ENST00000569245 MATR3P43243 847 aaKnown RBP eCLIP15.85■□□□□ 0.13
COMMD4-225ENST00000569245 YARSP54577 528 aaKnown RBP15.85■□□□□ 0.13
COMMD4-225ENST00000569245 OSTNP61366 133 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 COASYQ13057 564 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 KIAA1841Q6NSI8 718 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 TAS1R3Q7RTX0 852 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 GJD3Q8N144 294 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 TMEM161BQ8NDZ6 487 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 LRRC15Q8TF66 581 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 LARP4BQ92615 738 aaKnown RBP15.85■□□□□ 0.13
COMMD4-225ENST00000569245 CASP10Q92851 521 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 BICD1Q96G01 975 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 CCDC94Q9BW85 323 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-225ENST00000569245 APOL5Q9BWW9 433 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 VN1R3Q9BXE9 311 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms