RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 WDR78Q5VTH9 848 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 PCNX4Q63HM2 1172 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 MSL1Q68DK7 614 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 SLFN12LQ6IEE8 588 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 MFSD5Q6N075 450 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 CCDC137Q6PK04 289 aaKnown RBP8.19□□□□□ -1.1
ATXN3-250ENST00000568290 ARHGEF18Q6ZSZ5 1173 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 KRT27Q7Z3Y8 459 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 KIAA0825Q8IV33 1275 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 GLIS3Q8NEA6 775 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 SPIRE2Q8WWL2 714 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 CYFIP2Q96F07 1278 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 AP1M1Q9BXS5 423 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 FRMD8P1Q9BZ68 369 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-250ENST00000568290 TRIM7Q9C029 511 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 FAM117AQ9C073 453 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 LRRC19Q9H756 370 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 PPANQ9NQ55 473 aaKnown RBP8.19□□□□□ -1.1
ATXN3-250ENST00000568290 AVENQ9NQS1 362 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-250ENST00000568290 INTS9Q9NV88 658 aaKnown RBP8.19□□□□□ -1.1
ATXN3-250ENST00000568290 PPME1Q9Y570 386 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 PCDHA3Q9Y5H8 950 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 ACTL7BQ9Y614 415 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 ZHX2Q9Y6X8 837 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 ESYT3A0FGR9 886 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 DDTLA6NHG4 134 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 H0YGN5 161 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 O00370 1275 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 DDX3YO15523 660 aaKnown RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 CHMP2AO43633 222 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 CTNND1O60716 968 aaKnown RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 SUN1O94901 812 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 CYP1A2P05177 515 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 FAM153BP0C7A2 387 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 ERCC3P19447 782 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 ABCB4P21439 1286 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 TBXAS1P24557 533 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 NMT1P30419 496 aaKnown RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 RASSF2P50749 326 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 GPC3P51654 580 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 APLP1P51693 650 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 RNASE9P60153 205 aaKnown RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 YWHAEP62258 255 aaKnown RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 CDR2Q01850 454 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 GUCY1A3Q02108 690 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 NFIAQ12857 509 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 PTP4A2Q12974 167 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 IFT88Q13099 833 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 STAT4Q14765 748 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 SURF1Q15526 300 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 SNCBQ16143 134 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 FAM153CQ494X1 144 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 EPC2Q52LR7 807 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 BRDTQ58F21 947 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 ERMARDQ5T6L9 678 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 ACAD10Q6JQN1 1059 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 ZNF746Q6NUN9 644 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 DPY19L2P1Q6NXN4 242 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 HAUS6Q7Z4H7 955 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 FAM71AQ8IYT1 594 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 RPUSD2Q8IZ73 545 aaKnown RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 ANKRD35Q8N283 1001 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 FBXL13Q8NEE6 735 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 ATL2Q8NHH9 583 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 GIMAP7Q8NHV1 300 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 ZNF564Q8TBZ8 553 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 PIGOQ8TEQ8 1089 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 PIK3R5Q8WYR1 880 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 TLCD1Q96CP7 247 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 ANKRD27Q96NW4 1050 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 STRA6Q9BX79 667 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 IMPG2Q9BZV3 1241 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 UBN1Q9NPG3 1134 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 C1orf112Q9NSG2 853 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 NKIRAS1Q9NYS0 192 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 HSPBP1Q9NZL4 362 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 RGL1Q9NZL6 768 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 FAM153AQ9UHL3 310 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 SLC12A6Q9UHW9 1150 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 CCPG1Q9ULG6 757 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 PACSIN2Q9UNF0 486 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-250ENST00000568290 COQ4Q9Y3A0 265 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 NFS1Q9Y697 457 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 EMSYQ7Z589 1322 aa8.18□□□□□ -1.1
ATXN3-250ENST00000568290 LTBP1Q14766 1721 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 UBR3Q6ZT12 1888 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 MYH7BA7E2Y1 1941 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 MYO1FO00160 1098 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 EML1O00423 815 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 PSTPIP1O43586 416 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 HNRNPCL1O60812 293 aaKnown RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 TCEA3O75764 348 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 DGAT1O75907 488 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 DNAJC8O75937 253 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 GDF11O95390 407 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 CFHP08603 1231 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 DESP17661 470 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 VCAM1P19320 739 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 ALDH3A1P30838 453 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 MAPK4P31152 587 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms