RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 SPTY2D1Q68D10 685 aaPredicted RBP6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 ANKS6Q68DC2 871 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 FAM180AQ6UWF9 173 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 MIGA2Q7L4E1 593 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 GPRIN1Q7Z2K8 1008 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 OR5M3Q8NGP4 307 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 SLC35B2Q8TB61 432 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 Q8TCH9 128 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 CASKIN2Q8WXE0 1202 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 CLIP3Q96DZ5 547 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 TMEM176AQ96HP8 235 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 C8orf48Q96LL4 319 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 LRGUKQ96M69 825 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 ZNF512Q96ME7 567 aaPredicted RBP6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 SAMD11Q96NU1 681 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 OR14A2Q96R54 314 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 NMRK2Q9NPI5 230 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 LANCL2Q9NS86 450 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 DDX20Q9UHI6 824 aaKnown RBP6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 SLC23A1Q9UHI7 598 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 RCAN3Q9UKA8 241 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 AJAP1Q9UKB5 411 aaPredicted RBP6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 LRRC14BA6NHZ5 514 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 A6NNZ2 444 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 OFD1O75665 1012 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 ALDH2P05091 517 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 ALDH1A3P47895 512 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 FLT3LGP49771 235 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 SP140Q13342 867 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 PGS1Q32NB8 556 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 FAM47AQ5JRC9 791 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 CIR1Q86X95 450 aaPredicted RBP6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 PPP1R35Q8TAP8 253 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 CCHCR1Q8TD31 782 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 STON2Q8WXE9 905 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 CYFIP2Q96F07 1278 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 CDC5LQ99459 802 aaKnown RBP6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 ACO2Q99798 780 aaKnown RBP6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 LRFN3Q9BTN0 628 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 CPEB1Q9BZB8 566 aaKnown RBP6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 ACTL7AQ9Y615 435 aa6.27□□□□□ -1.41
SHCBP1-206ENST00000567698 PNPLA7Q6ZV29 1317 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 MYBBP1AQ9BQG0 1328 aaKnown RBP6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 CXorf49A8MYA2 514 aaPredicted RBP6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 GPR32O75388 356 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 HSPA6P17066 643 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 SYN1P17600 705 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 PTPN7P35236 360 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 MSX2P35548 267 aaPredicted RBP6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 MAP2K6P52564 334 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 TLE1Q04724 770 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 FKBP15Q5T1M5 1219 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 LCE3BQ5TA77 95 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 AFMIDQ63HM1 303 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 MAMDC4Q6UXC1 1216 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 DOK3Q7L591 496 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 OVCH2Q7RTZ1 564 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 WDR75Q8IWA0 830 aaKnown RBP6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 GIMAP8Q8ND71 665 aaPredicted RBP6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 CXorf38Q8TB03 319 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 MANSC1Q9H8J5 431 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 TDP1Q9NUW8 608 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 GABBR1Q9UBS5 961 aa6.26□□□□□ -1.41
SHCBP1-206ENST00000567698 NT5C1B-RDH14C9J2C7 533 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 DDCP20711 480 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 ZNF280AP59817 542 aaPredicted RBP6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 NFIXQ14938 502 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 OTUD7BQ6GQQ9 843 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 POLNQ7Z5Q5 900 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 XYLT1Q86Y38 959 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 GRAMD1CQ8IYS0 662 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 ZBTB34Q8NCN2 500 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 PLBD2Q8NHP8 589 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 C1GALT1C1Q96EU7 318 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 TMX3Q96JJ7 454 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 UHRF1Q96T88 793 aaPredicted RBP6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 MAP3K14Q99558 947 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 MYOCQ99972 504 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 BDH2Q9BUT1 245 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 OBP2AQ9NY56 170 aa6.25□□□□□ -1.41
SHCBP1-206ENST00000567698 VSTM5A8MXK1 200 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 H3BML4 177 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 U2AF1L5P0DN76 240 aaPredicted RBP6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 MYBP10242 640 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 HK3P52790 923 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 PER3P56645 1201 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 CTXN1P60606 82 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 U2AF1Q01081 240 aaKnown RBP eCLIP6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 GBX1Q14549 363 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 GRM3Q14832 879 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 MINDY4Q4G0A6 757 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 GLB1LQ6UWU2 654 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 SEM1Q6ZVN7 128 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 HTR3DQ70Z44 454 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 APBB1IPQ7Z5R6 666 aaPredicted RBP6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 TTC7BQ86TV6 843 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 PLXDC1Q8IUK5 500 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 DRC7Q8IY82 874 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms