RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	C12orf56	Q8IXR9	622 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	LINC01599	Q8WXQ3	324 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	LPP	Q93052	612 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	CCDC51	Q96ER9	411 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	CCDC94	Q9BW85	323 aa	Predicted RBP	10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	RPF1	Q9H9Y2	349 aa	Known RBP	10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	CHST12	Q9NRB3	414 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	FAM105A	Q9NUU6	356 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	RNF19A	Q9NV58	838 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	TAB2	Q9NYJ8	693 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	KLK14	Q9P0G3	267 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	IPP	Q9Y573	584 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	PCDHB2	Q9Y5E7	798 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	STYXL1	Q9Y6J8	313 aa		10.21	□□□□□ -0.77
FANCA-223	ENST00000567284	GBF1	Q92538	1859 aa		10.21	□□□□□ -0.78
FANCA-223	ENST00000567284	CXCL10	P02778	98 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	CXCL8	P10145	99 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	ITGA4	P13612	1032 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	ATP1A3	P13637	1013 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	KRT13	P13646	458 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	PRKCSH	P14314	528 aa	Predicted RBP	10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	GRM5	P41594	1212 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	FPGS	Q05932	587 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	SPAG1	Q07617	926 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	PPIG	Q13427	754 aa	Known RBP eCLIP	10.2	□□□□□ -0.78	3e-12	■■■■□ 26.2
FANCA-223	ENST00000567284	MYBPC2	Q14324	1141 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	SNRNP35	Q16560	246 aa	Known RBP	10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	TCERG1L	Q5VWI1	586 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	RPUSD2	Q8IZ73	545 aa	Known RBP	10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	SMG8	Q8ND04	991 aa	Known RBP	10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	APBB2	Q92870	758 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	CCDC127	Q96BQ5	260 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	ACAP3	Q96P50	834 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	FTHL17	Q9BXU8	183 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	VPS16	Q9H269	839 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	RNF39	Q9H2S5	420 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	IL23A	Q9NPF7	189 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	RBAK	Q9NYW8	714 aa	Predicted RBP	10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	LRFN2	Q9ULH4	789 aa		10.2	□□□□□ -0.78
FANCA-223	ENST00000567284	GOLGA6L3	A6NEY3	463 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	MEIS3P2	A8K0S8	358 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	ZBBX	A8MT70	800 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	LACTBL1	A8MY62	500 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	ENPP3	O14638	875 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	KIAA0391	O15091	583 aa	Known RBP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	SLC16A3	O15427	465 aa	Known RBP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	RECQL4	O94761	1208 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	UPP2	O95045	317 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	GNA14	O95837	355 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	SERPINC1	P01008	464 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	CLTA	P09496	248 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	TRIM49	P0CI25	452 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	TRIM49C	P0CI26	452 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	DLAT	P10515	647 aa	Known RBP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	VAMP7	P51809	220 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	YARS	P54577	528 aa	Known RBP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	WNT7B	P56706	349 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	CYP24A1	Q07973	514 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	IKBKE	Q14164	716 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	KRT31	Q15323	416 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	ENOX2	Q16206	610 aa	Known RBP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	TCP11X2	Q5H9J9	407 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	FOXR2	Q6PJQ5	311 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	OTOP2	Q7RTS6	562 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	ECHDC2	Q86YB7	292 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	IRF2BP1	Q8IU81	584 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	ZC3H3	Q8IXZ2	948 aa	Known RBP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	HACE1	Q8IYU2	909 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	ANKRD20A12P	Q8NF67	263 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	FAM84A	Q96KN4	292 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	FNBP1	Q96RU3	617 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	POP1	Q99575	1024 aa	Known RBP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	HSD3B7	Q9H2F3	369 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	KIAA1586	Q9HCI6	787 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	PDE11A	Q9HCR9	933 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	RGS18	Q9NS28	235 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	C1orf112	Q9NSG2	853 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	CPSF3	Q9UKF6	684 aa	Known RBP	10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	INPP5F	Q9Y2H2	1132 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	PCDHB7	Q9Y5E2	793 aa		10.19	□□□□□ -0.78
FANCA-223	ENST00000567284	SCN1A	P35498	2009 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284		C9IYK1	514 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	FAM189A1	O60320	539 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	CLSTN1	O94985	981 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	FGB	P02675	491 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	TPM2	P07951	284 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	SKI	P12755	728 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	ACTN1	P12814	892 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	TNNI1	P19237	187 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	RAB27A	P51159	221 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	DLG4	P78352	724 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	FANCC	Q00597	558 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	PPP2R3A	Q06190	1150 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	BFSP1	Q12934	665 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 125 ms