RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 POU2F2P09086 479 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 GPC3P51654 580 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 KPNA1P52294 538 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-216ENST00000567071 PLK5Q496M5 336 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 MIS18BP1Q6P0N0 1132 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 Q6ZS52 159 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 TBC1D10CQ8IV04 446 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 COLEC11Q9BWP8 271 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 INO80BQ9C086 356 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-216ENST00000567071 RIOX1Q9H6W3 641 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 C8orf33Q9H7E9 229 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-216ENST00000567071 KCNH7Q9NS40 1196 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 CHST7Q9NS84 486 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 MARCH5Q9NX47 278 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 TCEAL9Q9UHQ7 104 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 IGKV6D-21A0A0A0MT36 114 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 MEIS3P2A8K0S8 358 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 ZBTB42B2RXF5 422 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 CAPN9O14815 690 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 ATXN7O15265 892 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-216ENST00000567071 CDC45O75419 566 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 POMCP01189 267 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 PSMC3P17980 439 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 RPL17P18621 184 aaKnown RBP10.91□□□□□ -0.66
CAPN3-216ENST00000567071 PXNP49023 591 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-216ENST00000567071 MLLT6P55198 1093 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-216ENST00000567071 CDC42EP1Q00587 391 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 TRMT1LQ7Z2T5 733 aaKnown RBP10.91□□□□□ -0.66
CAPN3-216ENST00000567071 RNF168Q8IYW5 571 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-216ENST00000567071 SYNPOQ8N3V7 929 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 LRRC71Q8N4P6 559 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 DEPDC1BQ8WUY9 529 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 HELLSQ9NRZ9 838 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 SLC8A2Q9UPR5 921 aa10.91□□□□□ -0.66
CAPN3-216ENST00000567071 CDX4O14627 284 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-216ENST00000567071 MEIS2O14770 477 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 ZNF213O14771 459 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 LMAN2Q12907 356 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 UVSSAQ2YD98 709 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 C8orf34Q49A92 452 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 SWSAP1Q6NVH7 229 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 MAP4K3Q8IVH8 894 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 CCDC60Q8IWA6 550 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-216ENST00000567071 YAF2Q8IY57 180 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
CAPN3-216ENST00000567071 LSM14AQ8ND56 463 aaKnown RBP10.9□□□□□ -0.66
CAPN3-216ENST00000567071 SLC7A14Q8TBB6 771 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 PIBF1Q8WXW3 757 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 EVI5LQ96CN4 794 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 FAM167AQ96KS9 214 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 DUSP15Q9H1R2 295 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-216ENST00000567071 UBN1Q9NPG3 1134 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 HCFC1R1Q9NWW0 138 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 PCDHB2Q9Y5E7 798 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 CELSR3Q9NYQ7 3312 aa10.9□□□□□ -0.66
CAPN3-216ENST00000567071 MYO9AB2RTY4 2548 aa10.9□□□□□ -0.67
CAPN3-216ENST00000567071 COL4A2P08572 1712 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 TEP1Q99973 2627 aaKnown RBP10.89□□□□□ -0.67
CAPN3-216ENST00000567071 TEX15Q9BXT5 2789 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 B4E1Z4 1266 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 DDX39AO00148 427 aaKnown RBP10.89□□□□□ -0.67
CAPN3-216ENST00000567071 ATG13O75143 517 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 CSDE1O75534 798 aaKnown RBP10.89□□□□□ -0.67
CAPN3-216ENST00000567071 GBP1P32455 592 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 HNRNPDQ14103 355 aaKnown RBP10.89□□□□□ -0.67
CAPN3-216ENST00000567071 FUT10Q6P4F1 479 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 ABHD15Q6UXT9 468 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 AGMOQ6ZNB7 445 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 RTL10Q7L3V2 364 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 CATSPER4Q7RTX7 472 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 CYP2U1Q7Z449 544 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 RAB44Q7Z6P3 723 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-216ENST00000567071 TMEFF1Q8IYR6 380 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 MDM1Q8TC05 714 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 B3GALT6Q96L58 329 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 MXRA8Q9BRK3 442 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 NUSAP1Q9BXS6 441 aaKnown RBP10.89□□□□□ -0.67
CAPN3-216ENST00000567071 DNMT3BQ9UBC3 853 aaKnown RBP10.89□□□□□ -0.67
CAPN3-216ENST00000567071 SEC63Q9UGP8 760 aaKnown RBP10.89□□□□□ -0.67
CAPN3-216ENST00000567071 NOTCH4Q99466 2003 aa10.89□□□□□ -0.67
CAPN3-216ENST00000567071 EML5Q05BV3 1969 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 TDRD15B5MCY1 1934 aaKnown RBP10.88□□□□□ -0.67
CAPN3-216ENST00000567071 EXTL3O43909 919 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 RHOP08100 348 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 CEBPBP17676 345 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 ABCG1P45844 678 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 MFAP1P55081 439 aaKnown RBP10.88□□□□□ -0.67
CAPN3-216ENST00000567071 KCNC4Q03721 635 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 MCMDC2Q4G0Z9 681 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 AXDND1Q5T1B0 1012 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-216ENST00000567071 C11orf74Q86VG3 221 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 COLGALT2Q8IYK4 626 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 ZNF843Q8N446 348 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 HDDC3Q8N4P3 179 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 CAMKK1Q8N5S9 505 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 RRP36Q96EU6 259 aaKnown RBP10.88□□□□□ -0.67
CAPN3-216ENST00000567071 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 PSTPIP2Q9H939 334 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 LY9Q9HBG7 655 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 DIAPH3Q9NSV4 1193 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms