RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 PDZD7Q9H5P4 517 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 PTPRHQ9HD43 1115 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 PCDHB7Q9Y5E2 793 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 CLDN3O15551 220 aa18.28■□□□□ 0.52
CLN6-208ENST00000567060 MCF2P10911 925 aa18.28■□□□□ 0.52
CLN6-208ENST00000567060 HTRA4P83105 476 aaPredicted RBP18.28■□□□□ 0.52
CLN6-208ENST00000567060 ZNF658Q5TYW1 1059 aaPredicted RBP18.28■□□□□ 0.52
CLN6-208ENST00000567060 CRIPAKQ8N1N5 446 aa18.28■□□□□ 0.52
CLN6-208ENST00000567060 GOLGA5Q8TBA6 731 aa18.28■□□□□ 0.52
CLN6-208ENST00000567060 SYAP1Q96A49 352 aaPredicted RBP18.28■□□□□ 0.52
CLN6-208ENST00000567060 TARS2Q9BW92 718 aaKnown RBP18.28■□□□□ 0.52
CLN6-208ENST00000567060 TBC1D7Q9P0N9 293 aa18.28■□□□□ 0.52
CLN6-208ENST00000567060 KIAA1468Q9P260 1216 aa18.28■□□□□ 0.52
CLN6-208ENST00000567060 LRFN2Q9ULH4 789 aa18.28■□□□□ 0.52
CLN6-208ENST00000567060 INSL6Q9Y581 213 aa18.28■□□□□ 0.52
CLN6-208ENST00000567060 STYXL1Q9Y6J8 313 aa18.28■□□□□ 0.52
CLN6-208ENST00000567060 CARNS1A5YM72 827 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 MYBP10242 640 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 MCL1Q07820 350 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 SKOR2Q2VWA4 1001 aaPredicted RBP18.27■□□□□ 0.52
CLN6-208ENST00000567060 ZC2HC1CQ53FD0 456 aaPredicted RBP18.27■□□□□ 0.52
CLN6-208ENST00000567060 UBXN11Q5T124 520 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 ZNF598Q86UK7 904 aaKnown RBP18.27■□□□□ 0.52
CLN6-208ENST00000567060 MYOCDQ8IZQ8 938 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 SYCP3Q8IZU3 236 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 GUF1Q8N442 669 aaKnown RBP18.27■□□□□ 0.52
CLN6-208ENST00000567060 FBXO22Q8NEZ5 403 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 GPT2Q8TD30 523 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 SP7Q8TDD2 431 aaPredicted RBP18.27■□□□□ 0.52
CLN6-208ENST00000567060 TMEM174Q8WUU8 243 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 SCFD1Q8WVM8 642 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 CPB2Q96IY4 423 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 GBP3Q9H0R5 595 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 SLC39A2Q9NP94 309 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 PCDHB2Q9Y5E7 798 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 COL4A6Q14031 1691 aa18.27■□□□□ 0.52
CLN6-208ENST00000567060 GARTP22102 1010 aa18.26■□□□□ 0.51
CLN6-208ENST00000567060 SSTR3P32745 418 aaPredicted RBP18.26■□□□□ 0.51
CLN6-208ENST00000567060 CASP5P51878 434 aa18.26■□□□□ 0.51
CLN6-208ENST00000567060 STK4Q13043 487 aa18.26■□□□□ 0.51
CLN6-208ENST00000567060 NOLC1Q14978 699 aaKnown RBP eCLIP18.26■□□□□ 0.51
CLN6-208ENST00000567060 KNOP1Q1ED39 458 aaKnown RBP18.26■□□□□ 0.51
CLN6-208ENST00000567060 ZNF568Q3ZCX4 644 aa18.26■□□□□ 0.51
CLN6-208ENST00000567060 HS2ST1Q7LGA3 356 aa18.26■□□□□ 0.51
CLN6-208ENST00000567060 KIAA0895Q8NCT3 520 aa18.26■□□□□ 0.51
CLN6-208ENST00000567060 MRPL38Q96DV4 380 aaKnown RBP18.26■□□□□ 0.51
CLN6-208ENST00000567060 TCHPQ9BT92 498 aa18.26■□□□□ 0.51
CLN6-208ENST00000567060 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.26■□□□□ 0.51
CLN6-208ENST00000567060 H3BQ06 376 aaPredicted RBP18.25■□□□□ 0.51
CLN6-208ENST00000567060 ABLIM1O14639 778 aa18.25■□□□□ 0.51
CLN6-208ENST00000567060 INPPL1O15357 1258 aa18.25■□□□□ 0.51
CLN6-208ENST00000567060 PRPF6O94906 941 aaKnown RBP18.25■□□□□ 0.51
CLN6-208ENST00000567060 LDHAP00338 332 aaKnown RBP18.25■□□□□ 0.51
CLN6-208ENST00000567060 EDN1P05305 212 aa18.25■□□□□ 0.51
CLN6-208ENST00000567060 STIM1Q13586 685 aa18.25■□□□□ 0.51
CLN6-208ENST00000567060 KLHL40Q2TBA0 621 aa18.25■□□□□ 0.51
CLN6-208ENST00000567060 C12orf56Q8IXR9 622 aa18.25■□□□□ 0.51
CLN6-208ENST00000567060 TSPAN18Q96SJ8 248 aa18.25■□□□□ 0.51
CLN6-208ENST00000567060 GIT1Q9Y2X7 761 aa18.25■□□□□ 0.51
CLN6-208ENST00000567060 IPPQ9Y573 584 aa18.25■□□□□ 0.51
CLN6-208ENST00000567060 A0A0B4J269 797 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 TTLL13PA6NNM8 815 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 PDXKO00764 312 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 DGKIO75912 1065 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 NPTXRO95502 500 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 ITGA4P13612 1032 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 ALADP13716 330 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 GRM5P41594 1212 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 MYBPC2Q14324 1141 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 COL19A1Q14993 1142 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 EPC2Q52LR7 807 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 CCDC183Q5T5S1 534 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 FOXR2Q6PJQ5 311 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 RBM43Q6ZSC3 357 aaKnown RBP18.24■□□□□ 0.51
CLN6-208ENST00000567060 HPS3Q969F9 1004 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 CCDC94Q9BW85 323 aaPredicted RBP18.24■□□□□ 0.51
CLN6-208ENST00000567060 EIF2AQ9BY44 585 aaKnown RBP18.24■□□□□ 0.51
CLN6-208ENST00000567060 MRPL9Q9BYD2 267 aaKnown RBP18.24■□□□□ 0.51
CLN6-208ENST00000567060 FGFBP2Q9BYJ0 223 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 TMEM117Q9H0C3 514 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 CDT1Q9H211 546 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 TOPORSQ9NS56 1045 aaPredicted RBP18.24■□□□□ 0.51
CLN6-208ENST00000567060 TYW1Q9NV66 732 aaKnown RBP18.24■□□□□ 0.51
CLN6-208ENST00000567060 KANSL3Q9P2N6 904 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 MAN1B1Q9UKM7 699 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 MYO7AQ13402 2215 aa18.24■□□□□ 0.51
CLN6-208ENST00000567060 OGTO15294 1046 aa18.23■□□□□ 0.51
CLN6-208ENST00000567060 ATF7P17544 494 aaPredicted RBP18.23■□□□□ 0.51
CLN6-208ENST00000567060 MORC3Q14149 939 aa18.23■□□□□ 0.51
CLN6-208ENST00000567060 CAMK4Q16566 473 aa18.23■□□□□ 0.51
CLN6-208ENST00000567060 NFIL3Q16649 462 aa18.23■□□□□ 0.51
CLN6-208ENST00000567060 EEF1DP3Q658K8 133 aa18.23■□□□□ 0.51
CLN6-208ENST00000567060 GLB1LQ6UWU2 654 aa18.23■□□□□ 0.51
CLN6-208ENST00000567060 CMTR2Q8IYT2 770 aaKnown RBP18.23■□□□□ 0.51
CLN6-208ENST00000567060 ABI1Q8IZP0 508 aa18.23■□□□□ 0.51
CLN6-208ENST00000567060 SMG8Q8ND04 991 aaKnown RBP18.23■□□□□ 0.51
CLN6-208ENST00000567060 ZNF689Q96CS4 500 aaPredicted RBP18.23■□□□□ 0.51
CLN6-208ENST00000567060 RSAD1Q9HA92 442 aa18.23■□□□□ 0.51
CLN6-208ENST00000567060 KIAA1586Q9HCI6 787 aa18.23■□□□□ 0.51
CLN6-208ENST00000567060 ANKFY1Q9P2R3 1169 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms