RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 F8W810 466 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 NRP1O14786 923 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 CLASP2O75122 1294 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 NR1I2O75469 434 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 EDN1P05305 212 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 KRT18P05783 430 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 URODP06132 367 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 OSTNP61366 133 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 PDIA5Q14554 519 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 MCM6Q14566 821 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 PCBP1Q15365 356 aaKnown RBP eCLIP11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 SMAD2Q15796 467 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 RARS2Q5T160 578 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 FOXD4L5Q5VV16 416 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 EEF1DP3Q658K8 133 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 ZBTB33Q86T24 672 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 DDX53Q86TM3 631 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 CABP7Q86V35 215 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 GLYCTKQ8IVS8 523 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 ADHFE1Q8IWW8 467 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 FOXD4L4Q8WXT5 416 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 RPGRIP1Q96KN7 1286 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 B3GALT6Q96L58 329 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 MMTAG2Q9BU76 263 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 NFKBIZQ9BYH8 718 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 ZBP1Q9H171 429 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 ZHX3Q9H4I2 956 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 UBN1Q9NPG3 1134 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 KMT5AQ9NQR1 393 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 MIOSQ9NXC5 875 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 SNTG2Q9NY99 539 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 RAPGEFL1Q9UHV5 662 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 LHX6Q9UPM6 363 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 TCHHQ07283 1943 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 PHLPP2Q6ZVD8 1323 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 DENND4AQ7Z401 1863 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 NPHP3-ACAD11A0A0J9YXS1 232 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 FSD2A1L4K1 749 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 SFI1A8K8P3 1242 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 K7ERI5 159 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 SLC16A4O15374 487 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 RECQL4O94761 1208 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 ALDH2P05091 517 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 EPCAMP16422 314 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 PDCP20941 246 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 MUTP22033 750 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 MATR3P43243 847 aaKnown RBP eCLIP11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 POU5F1BQ06416 359 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 SF3A1Q15459 793 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 ZNF568Q3ZCX4 644 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 GLRA4Q5JXX5 417 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 ATF7IP2Q5U623 682 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 KIAA1841Q6NSI8 718 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 ANKRD54Q6NXT1 300 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 FAM173BQ6P4H8 233 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 BRAPQ7Z569 592 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 C12orf76Q8N812 135 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 SMRP1Q8NCR6 262 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 RSPH1Q8WYR4 309 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 CASP10Q92851 521 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 CALML4Q96GE6 196 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 MSLNLQ96KJ4 702 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 PRIMPOLQ96LW4 560 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 DRC1Q96MC2 740 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 PNMA5Q96PV4 448 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 POP1Q99575 1024 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 TMEM175Q9BSA9 504 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 VN1R3Q9BXE9 311 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 ANKFY1Q9P2R3 1169 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 GIT1Q9Y2X7 761 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 HCFC2Q9Y5Z7 792 aa11.13□□□□□ -0.63
GTF3C1-206ENST00000566779 A0A1B0GUA9 196 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 K7ELQ4 463 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 ACKR2O00590 384 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 PLA2G4BP0C869 781 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 CTSAP10619 480 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 COL9A1P20849 921 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 KLRC2P26717 231 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 MARCKSP29966 332 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 UBA7P41226 1012 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 NPTX2P47972 431 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 GLUD2P49448 558 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 EFNA5P52803 228 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 GRIN1Q05586 938 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 GRIK3Q13003 919 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 COASYQ13057 564 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 KARSQ15046 597 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 PTPN14Q15678 1187 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 RINT1Q6NUQ1 792 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 KANK3Q6NY19 840 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 APBB1IPQ7Z5R6 666 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 GPBP1Q86WP2 473 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 COLGALT2Q8IYK4 626 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 MRPL43Q8N983 215 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 BICD1Q96G01 975 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 TCHPQ9BT92 498 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 C1QTNF1Q9BXJ1 281 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 EMILIN2Q9BXX0 1053 aa11.12□□□□□ -0.63
GTF3C1-206ENST00000566779 CCDC113Q9H0I3 377 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms