RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 MAP4K3Q8IVH8 894 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 GAB3Q8WWW8 586 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 GAD1Q99259 594 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 CLSTN3Q9BQT9 956 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 JPH2Q9BR39 696 aaPredicted RBP10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 TTPALQ9BTX7 342 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 APOL6Q9BWW8 343 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 NIFKQ9BYG3 293 aaKnown RBP10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 NEUROG3Q9Y4Z2 214 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 IGLV3-22A0A075B6J6 115 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 IGKV6-21A0A0C4DH24 114 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 CCDC163A0A0D9SF12 145 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 SMCO2A6NFE2 343 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 CCDC69A6NI79 296 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 E7EWF7 191 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 ZNF197O14709 1029 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 ZNF263O14978 683 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 RPP40O75818 363 aaKnown RBP10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 TOP3BO95985 862 aaKnown RBP10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 PSMC3P17980 439 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 CSRP1P21291 193 aaKnown RBP10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 GDI1P31150 447 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 HOXA11P31270 313 aaPredicted RBP10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 SETQ01105 290 aaPredicted RBP10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 GRM2Q14416 872 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 UBXN11Q5T124 520 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 CASC1Q6TDU7 716 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 SRGAP1Q7Z6B7 1085 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 KBTBD6Q86V97 674 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 CEP57Q86XR8 500 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 HACE1Q8IYU2 909 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 SLC7A14Q8TBB6 771 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 MSANTD3Q96H12 275 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 NLRP4Q96MN2 994 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 C8orf33Q9H7E9 229 aaPredicted RBP10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 AVENQ9NQS1 362 aaPredicted RBP10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 HCFC1R1Q9NWW0 138 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 MIOSQ9NXC5 875 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 GIT1Q9Y2X7 761 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 MSRB2Q9Y3D2 182 aa10.12□□□□□ -0.79
VPS9D1-205ENST00000565452 SDK1Q7Z5N4 2213 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 SF3B1O75533 1304 aaKnown RBP eCLIP10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 F8W810 466 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 MAFO75444 373 aaPredicted RBP10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 AKAP3O75969 853 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 MICAL2O94851 1124 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 RHOP08100 348 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 CCDC192P0DO97 292 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 RDXP35241 583 aaKnown RBP10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 MPLP40238 635 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 SCNN1GP51170 649 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 RAB33AQ14088 237 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 PSMD5Q16401 504 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 MTERF2Q49AM1 385 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 XKR3Q5GH77 459 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 FAM78AQ5JUQ0 283 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 RTP2Q5QGT7 225 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 FAM171A1Q5VUB5 890 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 PPP1R18Q6NYC8 613 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 PDZD3Q86UT5 571 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 KSR1Q8IVT5 923 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 SYNPOQ8N3V7 929 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 SMG8Q8ND04 991 aaKnown RBP10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 LNX1Q8TBB1 728 aaPredicted RBP10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 CSGALNACT1Q8TDX6 532 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 PIK3R5Q8WYR1 880 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 ZC3H10Q96K80 434 aaKnown RBP10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 MTA3Q9BTC8 594 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 EDEM2Q9BV94 578 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 SMOC1Q9H4F8 434 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 IFT122Q9HBG6 1241 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 IPPQ9Y573 584 aa10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 ASH1LQ9NR48 2969 aaKnown RBP10.11□□□□□ -0.79
VPS9D1-205ENST00000565452 NBEAQ8NFP9 2946 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 PATJQ8NI35 1801 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 COL4A3Q01955 1670 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 DDX11L8A8MPP1 907 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 RHOBTB1O94844 696 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 CAVIN2O95810 425 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 CYP21A2P08686 494 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 SRGAP2CP0DJJ0 459 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 SFNP31947 248 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 OR1D2P34982 312 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 MLH1P40692 756 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 KPNA1P52294 538 aaPredicted RBP10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 JAK3P52333 1124 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 PRR16Q569H4 304 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 C19orf48Q6RUI8 117 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 EXOC8Q8IYI6 725 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 FANCBQ8NB91 859 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 FAM200AQ8TCP9 573 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 DEPDC1BQ8WUY9 529 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 E2F7Q96AV8 911 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 RNF39Q9H2S5 420 aa10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 SEPT9Q9UHD8 586 aaPredicted RBP10.1□□□□□ -0.79
VPS9D1-205ENST00000565452 DMXL2Q8TDJ6 3036 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 ASAP2O43150 1006 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 ERLIN2O94905 339 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 SEC24BO95487 1268 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 AXLP30530 894 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms