RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 PDLIM2Q96JY6 352 aa17.86■□□□□ 0.45
THUMPD1-203ENST00000565248 PPP1R9BQ96SB3 815 aa17.86■□□□□ 0.45
THUMPD1-203ENST00000565248 INO80BQ9C086 356 aaPredicted RBP17.86■□□□□ 0.45
THUMPD1-203ENST00000565248 TRMT13Q9NUP7 481 aaKnown RBP17.86■□□□□ 0.45
THUMPD1-203ENST00000565248 PRMT7Q9NVM4 692 aaPredicted RBP17.86■□□□□ 0.45
THUMPD1-203ENST00000565248 ARMCX3Q9UH62 379 aaPredicted RBP17.86■□□□□ 0.45
THUMPD1-203ENST00000565248 KAT6AQ92794 2004 aa17.86■□□□□ 0.45
THUMPD1-203ENST00000565248 M0QZ92 97 aa17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 PTMAP06454 111 aaKnown RBP17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 GPC3P51654 580 aa17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 NLRP11P59045 1033 aaKnown RBP17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 TAP1Q03518 808 aa17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 FKBP15Q5T1M5 1219 aa17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 TAS1R3Q7RTX0 852 aa17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 FAM186BQ8IYM0 893 aa17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 POMGNT1Q8WZA1 660 aa17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 GCOM2Q9BZD3 368 aaPredicted RBP17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 CCDC113Q9H0I3 377 aa17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 VPS16Q9H269 839 aa17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 KIAA1586Q9HCI6 787 aa17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 DMAC2Q9NW81 257 aa17.85■□□□□ 0.45
THUMPD1-203ENST00000565248 SCN5AQ14524 2016 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 A0A087WZ62 844 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 LGALS16A8MUM7 142 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 PITPNM1O00562 1244 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 ACKR2O00590 384 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 MAPK13O15264 365 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 TREHO43280 583 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 KRT13P13646 458 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 MATR3P43243 847 aaKnown RBP eCLIP17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 NCBP1Q09161 790 aaKnown RBP17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 BFSP2Q13515 415 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 PCBP1Q15365 356 aaKnown RBP eCLIP17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 USP37Q86T82 979 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 HERC6Q8IVU3 1022 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 VWCEQ96DN2 955 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 PRIMPOLQ96LW4 560 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 NAP1L5Q96NT1 182 aaPredicted RBP17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 FDXACB1Q9BRP7 624 aaPredicted RBP17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 RTN4Q9NQC3 1192 aaKnown RBP17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 HSPBP1Q9NZL4 362 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 NOD1Q9Y239 953 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 SCN10AQ9Y5Y9 1956 aa17.84■□□□□ 0.45
THUMPD1-203ENST00000565248 EPOPA6NHQ4 379 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 ANKRD63C9JTQ0 380 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 AKAP3O75969 853 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 BAIAP3O94812 1187 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 LDHAP00338 332 aaKnown RBP17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 KCNJ6P48051 423 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 MBTD1Q05BQ5 628 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 PRPF4BQ13523 1007 aaKnown RBP17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 NR1I3Q14994 352 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 FAM187BQ17R55 369 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 VWA3BQ502W6 1294 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 RUFY4Q6ZNE9 571 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 APTXQ7Z2E3 356 aaKnown RBP17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 APBB1IPQ7Z5R6 666 aaPredicted RBP17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 DNAJB3Q8WWF6 145 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 CBWD1Q9BRT8 395 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 IKZF4Q9H2S9 585 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 FZD8Q9H461 694 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 PCIF1Q9H4Z3 704 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 LMCD1Q9NZU5 365 aa17.83■□□□□ 0.44
THUMPD1-203ENST00000565248 TOM1L1O75674 476 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 ERLIN2O94905 339 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 IQCF3P0C7M6 154 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 UBXN1Q04323 297 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 KIZQ2M2Z5 673 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 GDF6Q6KF10 455 aaPredicted RBP17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 INTS8Q75QN2 995 aaKnown RBP17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 TRIM59Q8IWR1 403 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 GPD1LQ8N335 351 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 PPP1R13LQ8WUF5 828 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 ZNF668Q96K58 619 aaPredicted RBP17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 PPP1R16BQ96T49 567 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 TCHPQ9BT92 498 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 TARS2Q9BW92 718 aaKnown RBP17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 NDST4Q9H3R1 872 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 IFT122Q9HBG6 1241 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 STYXL1Q9Y6J8 313 aa17.82■□□□□ 0.44
THUMPD1-203ENST00000565248 TISP43B9A030 160 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 CLDN3O15551 220 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 SFPQP23246 707 aaKnown RBP eCLIP17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 CASP4P49662 377 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 ZNF200P98182 395 aaPredicted RBP17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 PTGISQ16647 500 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 ATF7IP2Q5U623 682 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 TCERG1LQ5VWI1 586 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 SLC39A4Q6P5W5 647 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 SERINC5Q86VE9 423 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 VSTM4Q8IW00 320 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 CCDC155Q8N6L0 562 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 SPC24Q8NBT2 197 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 ACO2Q99798 780 aaKnown RBP17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 ZBED2Q9BTP6 218 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 MSTO1Q9BUK6 570 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 ADAMTS10Q9H324 1103 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 ANKFY1Q9P2R3 1169 aa17.81■□□□□ 0.44
THUMPD1-203ENST00000565248 IMPACTQ9P2X3 320 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms