RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 UBE2TQ9NPD8 197 aaPredicted RBP21.18■□□□□ 0.98
CLN6-205ENST00000564846 LUC7LQ9NQ29 371 aaKnown RBP21.18■□□□□ 0.98
CLN6-205ENST00000564846 TOPORSQ9NS56 1045 aaPredicted RBP21.18■□□□□ 0.98
CLN6-205ENST00000564846 RAB20Q9NX57 234 aa21.18■□□□□ 0.98
CLN6-205ENST00000564846 TNFSF13BQ9Y275 285 aa21.18■□□□□ 0.98
CLN6-205ENST00000564846 FAM189A1O60320 539 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 VTNP04004 478 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 HARSP12081 509 aaKnown RBP21.17■□□□□ 0.98
CLN6-205ENST00000564846 CYBAP13498 195 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 TNNI1P19237 187 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 PSEN2P49810 448 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 PTK2Q05397 1052 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 GFPT1Q06210 699 aaPredicted RBP21.17■□□□□ 0.98
CLN6-205ENST00000564846 FSCN1Q16658 493 aaKnown RBP21.17■□□□□ 0.98
CLN6-205ENST00000564846 ZBTB41Q5SVQ8 909 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 BRSK2Q8IWQ3 736 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 TAS1R2Q8TE23 839 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 IRX2Q9BZI1 471 aaPredicted RBP21.17■□□□□ 0.98
CLN6-205ENST00000564846 GPR88Q9GZN0 384 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 MINDY3Q9H8M7 445 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 PDE11AQ9HCR9 933 aa21.17■□□□□ 0.98
CLN6-205ENST00000564846 KPNA6O60684 536 aa21.16■□□□□ 0.98
CLN6-205ENST00000564846 ZC3H11AO75152 810 aaKnown RBP eCLIP21.16■□□□□ 0.98
CLN6-205ENST00000564846 MYL3P08590 195 aa21.16■□□□□ 0.98
CLN6-205ENST00000564846 APLP1P51693 650 aa21.16■□□□□ 0.98
CLN6-205ENST00000564846 PRKCZQ05513 592 aa21.16■□□□□ 0.98
CLN6-205ENST00000564846 ZBTB33Q86T24 672 aa21.16■□□□□ 0.98
CLN6-205ENST00000564846 VPS36Q86VN1 386 aa21.16■□□□□ 0.98
CLN6-205ENST00000564846 TRPV1Q8NER1 839 aa21.16■□□□□ 0.98
CLN6-205ENST00000564846 NLRP7Q8WX94 980 aa21.16■□□□□ 0.98
CLN6-205ENST00000564846 WDR24Q96S15 920 aa21.16■□□□□ 0.98
CLN6-205ENST00000564846 CGRRF1Q99675 332 aa21.16■□□□□ 0.98
CLN6-205ENST00000564846 CNTNAP2Q9UHC6 1331 aa21.16■□□□□ 0.98
CLN6-205ENST00000564846 SMIM35A0A1B0GVV1 85 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 MBLAC1A4D2B0 266 aaPredicted RBP21.15■□□□□ 0.98
CLN6-205ENST00000564846 RIOK3O14730 519 aaKnown RBP21.15■□□□□ 0.98
CLN6-205ENST00000564846 EVI5O60447 810 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 GFPT2O94808 682 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 TBC1D8O95759 1140 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 IQCF3P0C7M6 154 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 MAGEA1P43355 309 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 SURF1Q15526 300 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 TMEM132AQ24JP5 1023 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 ZNF568Q3ZCX4 644 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 ZACNQ401N2 412 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 ARHGEF19Q8IW93 802 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 MYRIPQ8NFW9 859 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 ZNF516Q92618 1163 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 SEMA4DQ92854 862 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.15■□□□□ 0.98
CLN6-205ENST00000564846 GUCA1BQ9UMX6 200 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 ZSWIM8A7E2V4 1837 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 B4GALT5O43286 388 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 ABL1P00519 1130 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 C4BPAP04003 597 aaKnown RBP21.15■□□□□ 0.98
CLN6-205ENST00000564846 AP3M2P53677 418 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 CHMP4BP1P59074 171 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 IRX5P78411 483 aaPredicted RBP21.15■□□□□ 0.98
CLN6-205ENST00000564846 BEX3Q00994 111 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 ENOX2Q16206 610 aaKnown RBP21.15■□□□□ 0.98
CLN6-205ENST00000564846 AMHR2Q16671 573 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 ARHGAP44Q17R89 818 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 ZNF569Q5MCW4 686 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 C10orf76Q5T2E6 689 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 ZNF571Q7Z3V5 609 aaPredicted RBP21.15■□□□□ 0.98
CLN6-205ENST00000564846 SRGAP1Q7Z6B7 1085 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 FAM81BQ96LP2 452 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 NT5C1BQ96P26 610 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 LACRTQ9GZZ8 138 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 ADAMTS1Q9UHI8 967 aa21.15■□□□□ 0.98
CLN6-205ENST00000564846 CPSF3Q9UKF6 684 aaKnown RBP21.15■□□□□ 0.98
CLN6-205ENST00000564846 EVPLQ92817 2033 aa21.14■□□□□ 0.98
CLN6-205ENST00000564846 FANCGO15287 622 aa21.14■□□□□ 0.97
CLN6-205ENST00000564846 LRRN2O75325 713 aa21.14■□□□□ 0.97
CLN6-205ENST00000564846 MFAP3P55082 362 aa21.14■□□□□ 0.97
CLN6-205ENST00000564846 WNT7BP56706 349 aa21.14■□□□□ 0.97
CLN6-205ENST00000564846 GJA9P57773 515 aa21.14■□□□□ 0.97
CLN6-205ENST00000564846 SCLT1Q96NL6 688 aa21.14■□□□□ 0.97
CLN6-205ENST00000564846 A0A087X0T9 212 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 RCCD1A6NED2 376 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 PJA2O43164 708 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 FAM228BP0C875 321 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 PNMA6AP0CW24 399 aaPredicted RBP21.13■□□□□ 0.97
CLN6-205ENST00000564846 ADAM17P78536 824 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 PURAQ00577 322 aaKnown RBP21.13■□□□□ 0.97
CLN6-205ENST00000564846 SEZ6Q53EL9 994 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 PPM1KQ8N3J5 372 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 SPC25Q9HBM1 224 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 TRIM10Q9UDY6 481 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 FOXN3O00409 490 aaPredicted RBP21.13■□□□□ 0.97
CLN6-205ENST00000564846 SEPT4O43236 478 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 TNFSF9P41273 254 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 BMS1Q14692 1282 aaKnown RBP21.13■□□□□ 0.97
CLN6-205ENST00000564846 TDRD10Q5VZ19 366 aaKnown RBP21.13■□□□□ 0.97
CLN6-205ENST00000564846 ENOSF1Q7L5Y1 443 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 WDR49Q8IV35 697 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 HELQQ8TDG4 1101 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 PPP1R16BQ96T49 567 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 CDT1Q9H211 546 aa21.13■□□□□ 0.97
CLN6-205ENST00000564846 L2HGDHQ9H9P8 463 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms