RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 FLT3LGP49771 235 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 SEPT2Q15019 361 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 BMT2Q1RMZ1 405 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 NECAB2Q7Z6G3 386 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 OR10H5Q8NGA6 315 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 STON2Q8WXE9 905 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 UHRF1Q96T88 793 aaPredicted RBP6.58□□□□□ -1.36
UBR1-205ENST00000564540 ADI1Q9BV57 179 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 MRIQ9BWK5 157 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 LDAHQ9H6V9 325 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 ZBTB21Q9ULJ3 1066 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 ATRNL1Q5VV63 1379 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 TRIM24O15164 1050 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 ADH4P08319 380 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 ALOX15P16050 662 aaPredicted RBP6.57□□□□□ -1.36
UBR1-205ENST00000564540 ZFP36P26651 326 aaKnown RBP6.57□□□□□ -1.36
UBR1-205ENST00000564540 SREBF1P36956 1147 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 EVA1CP58658 441 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 FAM189BP81408 668 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 NHLH2Q02577 135 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 FAM50AQ14320 339 aaKnown RBP6.57□□□□□ -1.36
UBR1-205ENST00000564540 CLUL1Q15846 466 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 INAVAQ3KP66 663 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 FAM47AQ5JRC9 791 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 PGM2L1Q6PCE3 622 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 ZNF627Q7L945 461 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 ZNF572Q7Z3I7 529 aaPredicted RBP6.57□□□□□ -1.36
UBR1-205ENST00000564540 AMOTL1Q8IY63 956 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 PQLC1Q8N2U9 271 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 PPM1NQ8N819 430 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 OR2I1PQ8NGU4 316 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 TFAP2CQ92754 450 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 FAM193BQ96PV7 902 aaPredicted RBP6.57□□□□□ -1.36
UBR1-205ENST00000564540 TEX101Q9BY14 249 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 CCDC8Q9H0W5 538 aaPredicted RBP6.57□□□□□ -1.36
UBR1-205ENST00000564540 ZNF277Q9NRM2 450 aaPredicted RBP6.57□□□□□ -1.36
UBR1-205ENST00000564540 POGKQ9P215 609 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 DNM3Q9UQ16 869 aa6.57□□□□□ -1.36
UBR1-205ENST00000564540 CXorf49A8MYA2 514 aaPredicted RBP6.56□□□□□ -1.36
UBR1-205ENST00000564540 KATNA1O75449 491 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 RECQL4O94761 1208 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 MT-CO1P00395 513 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 GUCY2FP51841 1108 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 PER3P56645 1201 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 RNASE9P60153 205 aaKnown RBP6.56□□□□□ -1.36
UBR1-205ENST00000564540 MTMR1Q13613 665 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 EFCAB12Q6NXP0 572 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 DRICH1Q6PGQ1 229 aaPredicted RBP6.56□□□□□ -1.36
UBR1-205ENST00000564540 FAM180AQ6UWF9 173 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 PRPF38AQ8NAV1 312 aaKnown RBP6.56□□□□□ -1.36
UBR1-205ENST00000564540 DPF2Q92785 391 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 TRPM5Q9NZQ8 1165 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 TRHDEQ9UKU6 1024 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 CLCA2Q9UQC9 943 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 SIK3Q9Y2K2 1263 aa6.56□□□□□ -1.36
UBR1-205ENST00000564540 TRIM75PA6NK02 468 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 ZNF185O15231 689 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 PTGS2P35354 604 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 SLC6A9P48067 706 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 MGAT2Q10469 447 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 ABCB5Q2M3G0 1257 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 SYDE2Q5VT97 1194 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 AFMIDQ63HM1 303 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 GDF7Q7Z4P5 450 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 MRGPREQ86SM8 312 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 C1orf162Q8NEQ5 155 aaPredicted RBP6.55□□□□□ -1.36
UBR1-205ENST00000564540 HAS1Q92839 578 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 SLITRK6Q9H5Y7 841 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 AJAP1Q9UKB5 411 aaPredicted RBP6.55□□□□□ -1.36
UBR1-205ENST00000564540 CHST2Q9Y4C5 530 aa6.55□□□□□ -1.36
UBR1-205ENST00000564540 PNPLA7Q6ZV29 1317 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 FPR1P21462 350 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 GUCY1A2P33402 732 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 ALDH1A3P47895 512 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 RAP2BP61225 183 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 ITKQ08881 620 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 RHOUQ7L0Q8 258 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 MTMR8Q96EF0 704 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 PHACTR3Q96KR7 559 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 NEU1Q99519 415 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 MLST8Q9BVC4 326 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 SENP6Q9GZR1 1112 aaPredicted RBP6.54□□□□□ -1.36
UBR1-205ENST00000564540 LANCL2Q9NS86 450 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 MKS1Q9NXB0 559 aa6.54□□□□□ -1.36
UBR1-205ENST00000564540 PJA2O43164 708 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 PCDHGA12O60330 932 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 NCR1O76036 304 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 RAP2AP10114 183 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 MYBL2P10244 700 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 ZSCAN20P17040 1043 aaPredicted RBP6.53□□□□□ -1.36
UBR1-205ENST00000564540 PCSK1P29120 753 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 CHN2P52757 468 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 CLRN1P58418 232 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 SP140Q13342 867 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 ACAP2Q15057 778 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 ATXN7L2Q5T6C5 722 aaPredicted RBP6.53□□□□□ -1.36
UBR1-205ENST00000564540 METRNLQ641Q3 311 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.53□□□□□ -1.36
UBR1-205ENST00000564540 ZFP28Q8NHY6 868 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 CCHCR1Q8TD31 782 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms