RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 PLPP4Q5VZY2 271 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 EEF1DP3Q658K8 133 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 MPZL3Q6UWV2 235 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 ZPBP2Q6X784 338 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 HAUS6Q7Z4H7 955 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 COLGALT2Q8IYK4 626 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 EFHBQ8N7U6 833 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 TMEM87AQ8NBN3 555 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 LRRC15Q8TF66 581 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 ZFP42Q96MM3 310 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 TARS2Q9BW92 718 aaKnown RBP14.69□□□□□ -0.06
CLK3-216ENST00000564468 COLEC11Q9BWP8 271 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 TOPORSQ9NS56 1045 aaPredicted RBP14.69□□□□□ -0.06
CLK3-216ENST00000564468 MIOSQ9NXC5 875 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 KLK14Q9P0G3 267 aa14.69□□□□□ -0.06
CLK3-216ENST00000564468 PDCD11Q14690 1871 aaKnown RBP14.69□□□□□ -0.06
CLK3-216ENST00000564468 FAM86C2PA6NEL3 165 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 K7ENM7 598 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 TOM1L1O75674 476 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 RECQL4O94761 1208 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 THP07101 528 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 SSTR3P32745 418 aaPredicted RBP14.68□□□□□ -0.06
CLK3-216ENST00000564468 GRM5P41594 1212 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 NDUFV1P49821 464 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 ADAM15Q13444 863 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 DUSP6Q16828 381 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 FOXD4L6Q3SYB3 417 aaPredicted RBP14.68□□□□□ -0.06
CLK3-216ENST00000564468 FOXD4L3Q6VB84 417 aaPredicted RBP14.68□□□□□ -0.06
CLK3-216ENST00000564468 TAS1R3Q7RTX0 852 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 RBM23Q86U06 439 aaKnown RBP14.68□□□□□ -0.06
CLK3-216ENST00000564468 FAM178BQ8IXR5 827 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 GJD3Q8N144 294 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 VPS52Q8N1B4 723 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 BICD1Q96G01 975 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 CUEDC2Q9H467 287 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 PTPRHQ9HD43 1115 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 SEL1LQ9UBV2 794 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 SSX2IPQ9Y2D8 614 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 USP20Q9Y2K6 914 aa14.68□□□□□ -0.06
CLK3-216ENST00000564468 CLDN3O15551 220 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 BRD1O95696 1058 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 CXCL14O95715 111 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 CTSAP10619 480 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 GAP43P17677 238 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 PROZP22891 400 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 CA8P35219 290 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 ME1P48163 572 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 AMPD3Q01432 767 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 DNM1Q05193 864 aaKnown RBP14.67□□□□□ -0.06
CLK3-216ENST00000564468 TUSC3Q13454 348 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 PKP1Q13835 747 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 KYAT1Q16773 422 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 ADGRD2Q7Z7M1 963 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 ALYREFQ86V81 257 aaKnown RBP14.67□□□□□ -0.06
CLK3-216ENST00000564468 MRPL43Q8N983 215 aaKnown RBP14.67□□□□□ -0.06
CLK3-216ENST00000564468 GSTCDQ8NEC7 633 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 DDX12PQ92771 950 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 PYM1Q9BRP8 204 aaKnown RBP14.67□□□□□ -0.06
CLK3-216ENST00000564468 PANK2Q9BZ23 570 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 CDT1Q9H211 546 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 C11orf16Q9NQ32 467 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 FAM13BQ9NYF5 915 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 GDAQ9Y2T3 454 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 PRG3Q9Y2Y8 225 aaPredicted RBP14.67□□□□□ -0.06
CLK3-216ENST00000564468 IRAK3Q9Y616 596 aa14.67□□□□□ -0.06
CLK3-216ENST00000564468 MTCL1Q9Y4B5 1905 aaKnown RBP14.66□□□□□ -0.06
CLK3-216ENST00000564468 C2orf71A6NGG8 1288 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 MATR3P43243 847 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLK3-216ENST00000564468 LIG4P49917 911 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 KRT85P78386 507 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 NOLC1Q14978 699 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLK3-216ENST00000564468 DYMQ7RTS9 669 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 ZBTB33Q86T24 672 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 TMEM173Q86WV6 379 aaPredicted RBP14.66□□□□□ -0.06
CLK3-216ENST00000564468 PDILTQ8N807 584 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 IQUBQ8NA54 791 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 ACAP3Q96P50 834 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 ZBP1Q9H171 429 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 TNMDQ9H2S6 317 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 ST6GALNAC4Q9H4F1 302 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 MAGEF1Q9HAY2 307 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 RCOR1Q9UKL0 485 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 TBX20Q9UMR3 447 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 PCDHGC5Q9Y5F6 944 aa14.66□□□□□ -0.06
CLK3-216ENST00000564468 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.65□□□□□ -0.06
CLK3-216ENST00000564468 MYMKA6NI61 221 aa14.65□□□□□ -0.06
CLK3-216ENST00000564468 HIDE1A8MVS5 230 aa14.65□□□□□ -0.06
CLK3-216ENST00000564468 H3BQ06 376 aaPredicted RBP14.65□□□□□ -0.06
CLK3-216ENST00000564468 HNRNPDLO14979 420 aaKnown RBP14.65□□□□□ -0.06
CLK3-216ENST00000564468 PER2O15055 1255 aa14.65□□□□□ -0.06
CLK3-216ENST00000564468 B4GALT3O60512 393 aa14.65□□□□□ -0.06
CLK3-216ENST00000564468 TADA2AO75478 443 aa14.65□□□□□ -0.06
CLK3-216ENST00000564468 PIGRP01833 764 aa14.65□□□□□ -0.06
CLK3-216ENST00000564468 SOD2P04179 222 aa14.65□□□□□ -0.06
CLK3-216ENST00000564468 GTF2F1P35269 517 aaKnown RBP eCLIP14.65□□□□□ -0.06
CLK3-216ENST00000564468 LTBRP36941 435 aa14.65□□□□□ -0.06
CLK3-216ENST00000564468 GTF2BQ00403 316 aa14.65□□□□□ -0.06
CLK3-216ENST00000564468 MCL1Q07820 350 aa14.65□□□□□ -0.06
CLK3-216ENST00000564468 PTCRAQ6ISU1 281 aaPredicted RBP14.65□□□□□ -0.06
CLK3-216ENST00000564468 PPFIBP1Q86W92 1011 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms