RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 WNT7BP56706 349 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 SNRNP35Q16560 246 aaKnown RBP29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.42■■■□□ 2.37e-7■■■■□ 22.4
SH3GL3-205ENST00000563901 RPUSD2Q8IZ73 545 aaKnown RBP29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 TMEM174Q8WUU8 243 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 FBXL18Q96ME1 805 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 BECN2A8MW95 431 aa29.41■■■□□ 2.3
SH3GL3-205ENST00000563901 IKBKBO14920 756 aa29.41■■■□□ 2.3
SH3GL3-205ENST00000563901 CAVIN2O95810 425 aa29.41■■■□□ 2.3
SH3GL3-205ENST00000563901 GRM5P41594 1212 aa29.41■■■□□ 2.3
SH3GL3-205ENST00000563901 MYBPC2Q14324 1141 aa29.41■■■□□ 2.3
SH3GL3-205ENST00000563901 OTOP2Q7RTS6 562 aa29.41■■■□□ 2.3
SH3GL3-205ENST00000563901 CEP63Q96MT8 703 aa29.41■■■□□ 2.3
SH3GL3-205ENST00000563901 CPSF3Q9UKF6 684 aaKnown RBP29.41■■■□□ 2.3
SH3GL3-205ENST00000563901 NR2E3Q9Y5X4 410 aa29.41■■■□□ 2.3
SH3GL3-205ENST00000563901 A0A0U1RQF3 1178 aa29.4■■■□□ 2.3
SH3GL3-205ENST00000563901 CXCL8P10145 99 aa29.4■■■□□ 2.3
SH3GL3-205ENST00000563901 IKBKEQ14164 716 aa29.4■■■□□ 2.3
SH3GL3-205ENST00000563901 ECHDC2Q86YB7 292 aa29.4■■■□□ 2.3
SH3GL3-205ENST00000563901 CREBRFQ8IUR6 639 aa29.4■■■□□ 2.3
SH3GL3-205ENST00000563901 LBHD1Q9BQE6 289 aaPredicted RBP29.4■■■□□ 2.3
SH3GL3-205ENST00000563901 TRAIPQ9BWF2 469 aa29.4■■■□□ 2.3
SH3GL3-205ENST00000563901 RNF19AQ9NV58 838 aa29.4■■■□□ 2.3
SH3GL3-205ENST00000563901 FRMD4BQ9Y2L6 1034 aa29.4■■■□□ 2.3
SH3GL3-205ENST00000563901 TTC3P53804 2025 aa29.4■■■□□ 2.3
SH3GL3-205ENST00000563901 PDCD11Q14690 1871 aaKnown RBP29.4■■■□□ 2.3
SH3GL3-205ENST00000563901 ENOX2Q16206 610 aaKnown RBP29.39■■■□□ 2.3
SH3GL3-205ENST00000563901 ZNF365Q70YC5 407 aa29.39■■■□□ 2.3
SH3GL3-205ENST00000563901 SLC24A5Q71RS6 500 aa29.39■■■□□ 2.3
SH3GL3-205ENST00000563901 APBB1IPQ7Z5R6 666 aaPredicted RBP29.39■■■□□ 2.3
SH3GL3-205ENST00000563901 FAM186BQ8IYM0 893 aa29.39■■■□□ 2.3
SH3GL3-205ENST00000563901 KLK14Q9P0G3 267 aa29.39■■■□□ 2.3
SH3GL3-205ENST00000563901 RECQL4O94761 1208 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 PFKMP08237 780 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 FILIP1Q7Z7B0 1213 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 PLEKHO2Q8TD55 490 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 FAM84AQ96KN4 292 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 CNOT6LQ96LI5 555 aaKnown RBP29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 THAP9Q9H5L6 903 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 RBAKQ9NYW8 714 aaPredicted RBP29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 PARP2Q9UGN5 583 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 SMTNL1A8MU46 457 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 KIAA0391O15091 583 aaKnown RBP29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 LDHAP00338 332 aaKnown RBP29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 PSMC2P35998 433 aaKnown RBP29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 RAB27AP51159 221 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 CDKAL1Q5VV42 579 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 ZNF598Q86UK7 904 aaKnown RBP29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 FAM212AQ96EL1 285 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 CCDC94Q9BW85 323 aaPredicted RBP29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 C1orf112Q9NSG2 853 aa29.38■■■□□ 2.29
SH3GL3-205ENST00000563901 ZNF233A6NK53 670 aa29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 CLTAP09496 248 aa29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 EPB41P11171 864 aaKnown RBP29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 ATP1A3P13637 1013 aa29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 CYP24A1Q07973 514 aa29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 SLC10A6Q3KNW5 377 aa29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 CCDC40Q4G0X9 1142 aa29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 TMEM240Q5SV17 173 aa29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 AGMOQ6ZNB7 445 aa29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 TMCO2Q7Z6W1 182 aaPredicted RBP29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 MRPL10Q7Z7H8 261 aaKnown RBP29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 ACAP3Q96P50 834 aa29.37■■■□□ 2.29
SH3GL3-205ENST00000563901 SLC16A3O15427 465 aaKnown RBP29.36■■■□□ 2.29
SH3GL3-205ENST00000563901 ZNF623O75123 536 aa29.36■■■□□ 2.29
SH3GL3-205ENST00000563901 ITGA4P13612 1032 aa29.36■■■□□ 2.29
SH3GL3-205ENST00000563901 MAGEA10P43363 369 aaPredicted RBP29.36■■■□□ 2.29
SH3GL3-205ENST00000563901 FAM189BP81408 668 aa29.36■■■□□ 2.29
SH3GL3-205ENST00000563901 DEFB103AP81534 67 aa29.36■■■□□ 2.29
SH3GL3-205ENST00000563901 SPAG1Q07617 926 aa29.36■■■□□ 2.29
SH3GL3-205ENST00000563901 BORCS6Q96GS4 357 aa29.36■■■□□ 2.29
SH3GL3-205ENST00000563901 RPF1Q9H9Y2 349 aaKnown RBP29.36■■■□□ 2.29
SH3GL3-205ENST00000563901 KIAA1586Q9HCI6 787 aa29.36■■■□□ 2.29
SH3GL3-205ENST00000563901 ABHD14A-ACY1A0A1B0GW23 586 aa29.35■■■□□ 2.29
SH3GL3-205ENST00000563901 FGFR1OPO95684 399 aaKnown RBP29.35■■■□□ 2.29
SH3GL3-205ENST00000563901 FGBP02675 491 aa29.35■■■□□ 2.29
SH3GL3-205ENST00000563901 BRSK2Q8IWQ3 736 aa29.35■■■□□ 2.29
SH3GL3-205ENST00000563901 CCDC127Q96BQ5 260 aa29.35■■■□□ 2.29
SH3GL3-205ENST00000563901 PDE11AQ9HCR9 933 aa29.35■■■□□ 2.29
SH3GL3-205ENST00000563901 KCNJ18B7U540 433 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 ZNF18P17022 549 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 AFF1P51825 1210 aaKnown RBP29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 WDR5P61964 334 aaKnown RBP29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 DLG4P78352 724 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 KCNJ12Q14500 433 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 MFSD14AQ96MC6 490 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 ZFP42Q96MM3 310 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 POP1Q99575 1024 aaKnown RBP29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 MKNK1Q9BUB5 465 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 TDRD15B5MCY1 1934 aaKnown RBP29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 CEP290O15078 2479 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 LACTBL1A8MY62 500 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 GOLGA6L19H0YKK7 550 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 FGFR1P11362 822 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 ACTN1P12814 892 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 TMEM130Q8N3G9 435 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 SNX27Q96L92 541 aa29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 CXXC1Q9P0U4 656 aaPredicted RBP29.34■■■□□ 2.29
SH3GL3-205ENST00000563901 PTPRJQ12913 1337 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms