RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 FBXL13Q8NEE6 735 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 GMCL1Q96IK5 515 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 STK38LQ9Y2H1 464 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 DCAF8L1A6NGE4 600 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 F8VZ95 297 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 LIN7AO14910 233 aaPredicted RBP11.16□□□□□ -0.62
RNF40-204ENST00000563683 ACOT2P49753 483 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 CCNHP51946 323 aaPredicted RBP11.16□□□□□ -0.62
RNF40-204ENST00000563683 CCDC38Q502W7 563 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 FOXR2Q6PJQ5 311 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 C15orf52Q6ZUT6 534 aaKnown RBP11.16□□□□□ -0.62
RNF40-204ENST00000563683 KIRREL3Q8IZU9 778 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 PAF1Q8N7H5 531 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 MICAL1Q8TDZ2 1067 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 RSAD2Q8WXG1 361 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
RNF40-204ENST00000563683 CDHR1Q96JP9 859 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 TAAR1Q96RJ0 339 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 PI4K2AQ9BTU6 479 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 TMEM150BA6NC51 233 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 NFIBO00712 420 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 SLITRK3O94933 977 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 SLC12A3P55017 1021 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 BIRC2Q13490 618 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 ZNF268Q14587 947 aaPredicted RBP11.15□□□□□ -0.62
RNF40-204ENST00000563683 SNRNP35Q16560 246 aaKnown RBP11.15□□□□□ -0.62
RNF40-204ENST00000563683 HP1BP3Q5SSJ5 553 aaPredicted RBP11.15□□□□□ -0.62
RNF40-204ENST00000563683 MOXD1Q6UVY6 613 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 PPP1R21Q6ZMI0 780 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 BZW1Q7L1Q6 419 aaKnown RBP11.15□□□□□ -0.62
RNF40-204ENST00000563683 ZNF720Q7Z2F6 126 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 NSUN6Q8TEA1 469 aaKnown RBP11.15□□□□□ -0.62
RNF40-204ENST00000563683 TLCD1Q96CP7 247 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 PIM2Q9P1W9 311 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 GLI3P10071 1580 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 SGK1O00141 431 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 PODXLO00592 558 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 PMS2P54278 862 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 CRY2Q49AN0 593 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 C2CD6Q53TS8 623 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 DALRD3Q5D0E6 543 aaKnown RBP11.15□□□□□ -0.62
RNF40-204ENST00000563683 DACT2Q5SW24 774 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 MCPH1Q8NEM0 835 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 SLC35C1Q96A29 364 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 ZNRF3Q9ULT6 936 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 LRRD1A4D1F6 860 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 TNNC2P02585 160 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 ITGA4P13612 1032 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 CHN1P15882 459 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 ZNF131P52739 623 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 RBBP5Q15291 538 aaKnown RBP11.15□□□□□ -0.62
RNF40-204ENST00000563683 CTAGE3PQ8IX95 158 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 GDAP1Q8TB36 358 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 NLRP4Q96MN2 994 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 PNMA2Q9UL42 364 aa11.15□□□□□ -0.62
RNF40-204ENST00000563683 EIF3DO15371 548 aaKnown RBP eCLIP11.14□□□□□ -0.63
RNF40-204ENST00000563683 FGFR4P22455 802 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 ALDH3A1P30838 453 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 Q4G0T1 1027 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 OTOP1Q7RTM1 612 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 PIGWQ7Z7B1 504 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 ZNF483Q8TF39 744 aaPredicted RBP11.14□□□□□ -0.63
RNF40-204ENST00000563683 CPA5Q8WXQ8 436 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 ANKRD27Q96NW4 1050 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 MRPL47Q9HD33 250 aaKnown RBP11.14□□□□□ -0.63
RNF40-204ENST00000563683 AIPL1Q9NZN9 384 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 TTC7AQ9ULT0 858 aaPredicted RBP11.14□□□□□ -0.63
RNF40-204ENST00000563683 PLS3P13797 630 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 COMTP21964 271 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 GABPAQ06546 454 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 FAM133BQ5BKY9 247 aaKnown RBP11.14□□□□□ -0.63
RNF40-204ENST00000563683 PALM2Q8IXS6 379 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 TMEM143Q96AN5 459 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 BTBD6Q96KE9 485 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 POP1Q99575 1024 aaKnown RBP11.14□□□□□ -0.63
RNF40-204ENST00000563683 RIT2Q99578 217 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 FAM118BQ9BPY3 351 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 ELAC2Q9BQ52 826 aaKnown RBP11.14□□□□□ -0.63
RNF40-204ENST00000563683 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 TMX2Q9Y320 296 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 CLDN3O15551 220 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 STAM2O75886 525 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 NR3C2P08235 984 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 NQO1P15559 274 aaKnown RBP11.14□□□□□ -0.63
RNF40-204ENST00000563683 CNGA1P29973 690 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 GBP1P32455 592 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 ATP11AP98196 1134 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 ZRSR2Q15696 482 aaKnown RBP11.14□□□□□ -0.63
RNF40-204ENST00000563683 DNAJC24Q6P3W2 148 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 SAMD7Q7Z3H4 446 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 CBWD2Q8IUF1 395 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 MDM1Q8TC05 714 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 ZNF317Q96PQ6 595 aaPredicted RBP11.14□□□□□ -0.63
RNF40-204ENST00000563683 MKNK1Q9BUB5 465 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 POLR3FQ9H1D9 316 aaPredicted RBP11.14□□□□□ -0.63
RNF40-204ENST00000563683 KCNMB3Q9NPA1 279 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 CORO1CQ9ULV4 474 aaPredicted RBP11.14□□□□□ -0.63
RNF40-204ENST00000563683 SPDYE2BA6NHP3 402 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 TISP43B9A030 160 aa11.14□□□□□ -0.63
RNF40-204ENST00000563683 KRT1P04264 644 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms