RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 NLRP4Q96MN2 994 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 C16orf70Q9BSU1 422 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 PI4K2AQ9BTU6 479 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 RBAKQ9NYW8 714 aaPredicted RBP10.17□□□□□ -0.78
LINC00838-201ENST00000562956 FAM170AA1A519 330 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 SLC15A5A6NIM6 579 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 NCK2O43639 380 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 ACVR2BQ13705 512 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 FBXO38Q6PIJ6 1188 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 SAPCD2Q86UD0 394 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 SLC20A1Q8WUM9 679 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 GOLGA1Q92805 767 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 CLDN3O15551 220 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 PALMO75781 387 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 PRKCBP05771 671 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 CCDC172P0C7W6 258 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 TNNI1P19237 187 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 USP8P40818 1118 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 PRPF4BQ13523 1007 aaKnown RBP10.16□□□□□ -0.78
LINC00838-201ENST00000562956 DUSP28Q4G0W2 176 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 ZPBP2Q6X784 338 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 ZBTB33Q86T24 672 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 PALB2Q86YC2 1186 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 FMNL3Q8IVF7 1028 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 TATDN2Q93075 761 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 CAPZA3Q96KX2 299 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 FNBP1Q96RU3 617 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 ACO2Q99798 780 aaKnown RBP10.16□□□□□ -0.78
LINC00838-201ENST00000562956 JPH2Q9BR39 696 aaPredicted RBP10.16□□□□□ -0.78
LINC00838-201ENST00000562956 MRPL4Q9BYD3 311 aaKnown RBP10.16□□□□□ -0.78
LINC00838-201ENST00000562956 ABHD16BQ9H3Z7 469 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 ACP6Q9NPH0 428 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 SNX12Q9UMY4 172 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 BTNL10A8MVZ5 291 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 TMCO5BA8MYB1 307 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 FAM189A1O60320 539 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 TNFSF9P41273 254 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 MFAP3P55082 362 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 TAF1CQ15572 869 aaPredicted RBP10.16□□□□□ -0.78
LINC00838-201ENST00000562956 MAPK6Q16659 721 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 PRAMEF19Q5SWL8 479 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 MORN1Q5T089 497 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 TDRD10Q5VZ19 366 aaKnown RBP10.16□□□□□ -0.78
LINC00838-201ENST00000562956 ZBTB8OSQ8IWT0 167 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 FAM71AQ8IYT1 594 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 MMS19Q96T76 1030 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 MINDY3Q9H8M7 445 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 TAS2R14Q9NYV8 317 aa10.16□□□□□ -0.78
LINC00838-201ENST00000562956 CNTNAP2Q9UHC6 1331 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 MANSC4A6NHS7 340 aaPredicted RBP10.15□□□□□ -0.78
LINC00838-201ENST00000562956 PPFIA4O75335 1185 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 TOM1L1O75674 476 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 SGPL1O95470 568 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 LDHAP00338 332 aaKnown RBP10.15□□□□□ -0.78
LINC00838-201ENST00000562956 C4BPAP04003 597 aaKnown RBP10.15□□□□□ -0.78
LINC00838-201ENST00000562956 IQCF3P0C7M6 154 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 ZACNQ401N2 412 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 ZNF484Q5JVG2 852 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 NFRKBQ6P4R8 1299 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 SHC3Q92529 594 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 VTI1AQ96AJ9 217 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 NT5C1BQ96P26 610 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 PSMB7Q99436 277 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 AGPAT1Q99943 283 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 TCHPQ9BT92 498 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 TLR10Q9BXR5 811 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 SEPT11Q9NVA2 429 aaKnown RBP10.15□□□□□ -0.78
LINC00838-201ENST00000562956 FLRT1Q9NZU1 646 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 PLXNA1Q9UIW2 1896 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 PCDHGC5Q9Y5F6 944 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 SIP14410 1827 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 CTAGE15A4D2H0 777 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 GRID2IPA4D2P6 1211 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 H3BRB1 525 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 ABLIM1O14639 778 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 POLR3GO15318 223 aaPredicted RBP10.15□□□□□ -0.78
LINC00838-201ENST00000562956 CYP26A1O43174 497 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 B4GALT5O43286 388 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 VNN1O95497 513 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 FTCDO95954 541 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 MMP3P08254 477 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 H2AFZP0C0S5 128 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 CTAGE8P0CG41 777 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 TNFAIP3P21580 790 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 GALCP54803 685 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 RGMBQ6NW40 437 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 H2AFVQ71UI9 128 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 CTAGE6Q86UF2 777 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 CTAGE4Q8IX94 777 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 OR6J1Q8NGC5 347 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 COG1Q8WTW3 980 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 DHX38Q92620 1227 aaKnown RBP10.15□□□□□ -0.78
LINC00838-201ENST00000562956 RABGGTAQ92696 567 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 PPP1R16BQ96T49 567 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 C2orf40Q9H1Z8 148 aa10.15□□□□□ -0.78
LINC00838-201ENST00000562956 TUT1Q9H6E5 874 aaKnown RBP10.15□□□□□ -0.78
LINC00838-201ENST00000562956 INO80B-WBP1J3KQ70 363 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 PDE2AO00408 941 aaPredicted RBP10.14□□□□□ -0.79
LINC00838-201ENST00000562956 H2AFXP16104 143 aaPredicted RBP10.14□□□□□ -0.79
LINC00838-201ENST00000562956 CXCR5P32302 372 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms