RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 CSRNP2Q9H175 543 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 MAN1C1Q9NR34 630 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 GAGE12BA1L429 117 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 GAGE12HA6NDE8 117 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 ADCY6O43306 1168 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 DTNBO60941 627 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 ALAS1P13196 640 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 PTGS2P35354 604 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 EVA1CP58658 441 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 MXRA7P84157 204 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 RABL3Q5HYI8 236 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 PRAMEF14Q5SWL7 426 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 THEMIS2Q5TEJ8 643 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 OTUD7BQ6GQQ9 843 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 Q6ZVL8 140 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 ZBTB46Q86UZ6 589 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 ANKRD13AQ8IZ07 590 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 TRMT2AQ8IZ69 625 aaKnown RBP3.9□□□□□ -1.79
CHD9-207ENST00000562806 LILRA3Q8N6C8 439 aaPredicted RBP3.9□□□□□ -1.79
CHD9-207ENST00000562806 MB21D1Q8N884 522 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 NLGN4YQ8NFZ3 816 aaPredicted RBP3.9□□□□□ -1.79
CHD9-207ENST00000562806 MDM1Q8TC05 714 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 TFAP2CQ92754 450 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 HOXB13Q92826 284 aaPredicted RBP3.9□□□□□ -1.79
CHD9-207ENST00000562806 NUP88Q99567 741 aaPredicted RBP3.9□□□□□ -1.79
CHD9-207ENST00000562806 CCDC8Q9H0W5 538 aaPredicted RBP3.9□□□□□ -1.79
CHD9-207ENST00000562806 VPS11Q9H270 941 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 SPON1Q9HCB6 807 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 TCF7L1Q9HCS4 588 aa3.9□□□□□ -1.79
CHD9-207ENST00000562806 DDX56Q9NY93 547 aaKnown RBP3.9□□□□□ -1.79
CHD9-207ENST00000562806 CFAP20Q9Y6A4 193 aaKnown RBP3.9□□□□□ -1.79
CHD9-207ENST00000562806 LOC105371045A0A1W2PR82 267 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 KLRG2A4D1S0 409 aaPredicted RBP3.89□□□□□ -1.79
CHD9-207ENST00000562806 FZD9O00144 591 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 FZD7O75084 574 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 GPR32O75388 356 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 STC2O76061 302 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 ARIH2O95376 493 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 POMCP01189 267 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 AMHP03971 560 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 PDGFRBP09619 1106 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 U2AF1L5P0DN76 240 aaPredicted RBP3.89□□□□□ -1.79
CHD9-207ENST00000562806 ALOX15P16050 662 aaPredicted RBP3.89□□□□□ -1.79
CHD9-207ENST00000562806 ATP5JP18859 108 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 AKAP5P24588 427 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 GUCY1A2P33402 732 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 MCM7P33993 719 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 SCNN1GP51170 649 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 NEK2P51955 445 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 CDC42EP1Q00587 391 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 U2AF1Q01081 240 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD9-207ENST00000562806 CREMQ03060 361 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 PUM1Q14671 1186 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD9-207ENST00000562806 RAB39AQ14964 217 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 FAM214AQ32MH5 1076 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 Q6ZRM9 215 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 TTC7BQ86TV6 843 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 RSPH3Q86UC2 560 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 RPUSD2Q8IZ73 545 aaKnown RBP3.89□□□□□ -1.79
CHD9-207ENST00000562806 SYNE4Q8N205 404 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 PPM1NQ8N819 430 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 IL17DQ8TAD2 202 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 NRG4Q8WWG1 115 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 EXTL1Q92935 676 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 ZNF503Q96F45 646 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 TEKT5Q96M29 485 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 PLEKHG4BQ96PX9 1271 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 CAMKK2Q96RR4 588 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 NDC1Q9BTX1 674 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 LSM14BQ9BX40 385 aaKnown RBP3.89□□□□□ -1.79
CHD9-207ENST00000562806 SLC46A2Q9BY10 475 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 TDP1Q9NUW8 608 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 CALCOCO1Q9P1Z2 691 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 POGKQ9P215 609 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.89□□□□□ -1.79
CHD9-207ENST00000562806 EIF2B4Q9UI10 523 aaKnown RBP3.89□□□□□ -1.79
CHD9-207ENST00000562806 INTUQ9ULD6 942 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 TNKSO95271 1327 aa3.89□□□□□ -1.79
CHD9-207ENST00000562806 CXorf49A8MYA2 514 aaPredicted RBP3.88□□□□□ -1.79
CHD9-207ENST00000562806 MATN3O15232 486 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 SLC16A6O15403 523 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 PCDHGA12O60330 932 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 HLA-DOAP06340 250 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 HK1P19367 917 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 TNFRSF1AP19438 455 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 MAKP20794 623 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 C5AR1P21730 350 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 EPHB1P54762 984 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 KIF23Q02241 960 aaPredicted RBP3.88□□□□□ -1.79
CHD9-207ENST00000562806 TUBA3CQ13748 450 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 PCBP2Q15366 365 aaKnown RBP eCLIP3.88□□□□□ -1.79
CHD9-207ENST00000562806 MFSD14BQ5SR56 506 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 ATXN7L2Q5T6C5 722 aaPredicted RBP3.88□□□□□ -1.79
CHD9-207ENST00000562806 TUBA3EQ6PEY2 450 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 SEM1Q6ZVN7 128 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 SPRED1Q7Z699 444 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 PLXDC1Q8IUK5 500 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 RHOT1Q8IXI2 618 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 CACTINQ8WUQ7 758 aaKnown RBP3.88□□□□□ -1.79
CHD9-207ENST00000562806 COA7Q96BR5 231 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms