RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 LMBR1LQ6UX01 489 aa4.47□□□□□ -1.69
HDGFL3-202ENST00000562702 DHX37Q8IY37 1157 aaKnown RBP4.47□□□□□ -1.69
HDGFL3-202ENST00000562702 ZFP28Q8NHY6 868 aa4.47□□□□□ -1.69
HDGFL3-202ENST00000562702 TFAP2CQ92754 450 aa4.47□□□□□ -1.69
HDGFL3-202ENST00000562702 C1QTNF7Q9BXJ2 289 aa4.47□□□□□ -1.69
HDGFL3-202ENST00000562702 POFUT1Q9H488 388 aa4.47□□□□□ -1.69
HDGFL3-202ENST00000562702 SLC17A6Q9P2U8 582 aa4.47□□□□□ -1.69
HDGFL3-202ENST00000562702 MAP3K2Q9Y2U5 619 aa4.47□□□□□ -1.69
HDGFL3-202ENST00000562702 USP15Q9Y4E8 981 aaPredicted RBP4.47□□□□□ -1.69
HDGFL3-202ENST00000562702 MYPNQ86TC9 1320 aa4.46□□□□□ -1.69
HDGFL3-202ENST00000562702 KPNA6O60684 536 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 GAS7O60861 476 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 SIM1P81133 766 aaPredicted RBP4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 CCDC178Q5BJE1 867 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 CNNM4Q6P4Q7 775 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 Q6ZNX1 250 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 PDZD4Q76G19 769 aaPredicted RBP4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 KIF18BQ86Y91 864 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 AHI1Q8N157 1196 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 Q8N9P0 234 aaPredicted RBP4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 FERMT2Q96AC1 680 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 ORAI3Q9BRQ5 295 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 TEX101Q9BY14 249 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 ALOXE3Q9BYJ1 711 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 TBCCD1Q9NVR7 557 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 B4GALT6Q9UBX8 382 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 ZKSCAN5Q9Y2L8 839 aa4.46□□□□□ -1.7
HDGFL3-202ENST00000562702 KAT6AQ92794 2004 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 TBKBP1A7MCY6 615 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 SLC9A1P19634 815 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 GPR15P49685 360 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 MRPS35P82673 323 aaKnown RBP4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 UNQ6494/PRO21346Q6UXR6 183 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 C1QL2Q7Z5L3 287 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 SYT12Q8IV01 421 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 Q96MF0 132 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 ELF4Q99607 663 aaPredicted RBP4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 TARS2Q9BW92 718 aaKnown RBP4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 REXO4Q9GZR2 422 aaKnown RBP4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 TOMM22Q9NS69 142 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 DMTF1Q9Y222 760 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 SPO11Q9Y5K1 396 aa4.45□□□□□ -1.7
HDGFL3-202ENST00000562702 COL3A1P02461 1466 aaPredicted RBP4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 MARCH11A6NNE9 402 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 F2P00734 622 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 CFIP05156 583 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 CD40P25942 277 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 GYS2P54840 703 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 SART3Q15020 963 aaKnown RBP4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 GPR162Q16538 588 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 FAM102AQ5T9C2 384 aaPredicted RBP4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 ESPNLQ6ZVH7 1005 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 PTF1AQ7RTS3 328 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 PASD1Q8IV76 773 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 GLB1L2Q8IW92 636 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 RTF1Q92541 710 aaKnown RBP4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 CASS4Q9NQ75 786 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 IFT57Q9NWB7 429 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 USP18Q9UMW8 372 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 MAPRE3Q9UPY8 281 aa4.44□□□□□ -1.7
HDGFL3-202ENST00000562702 ORC4O43929 436 aa4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 PDE8AO60658 829 aa4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 MYCLP1P12525 358 aaPredicted RBP4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 SCNN1BP51168 640 aa4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 OCRLQ01968 901 aa4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 AKNAD1Q5T1N1 836 aa4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 ESRP1Q6NXG1 681 aaKnown RBP4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 OR2W6PQ8NHA6 318 aa4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 ACTRT2Q8TDY3 377 aa4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 GAB3Q8WWW8 586 aa4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 ZNF778Q96MU6 729 aa4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 MTFR1LQ9H019 292 aa4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 ALG13Q9NP73 1137 aaKnown RBP4.43□□□□□ -1.7
HDGFL3-202ENST00000562702 FAM83GA6ND36 823 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 LRRC3CA6NJW4 275 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 GSG1L2A8MUP6 293 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 SEC24DO94855 1032 aaPredicted RBP4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 DSG1Q02413 1049 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 MGAT5Q09328 741 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 BMT2Q1RMZ1 405 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 BTNL9Q6UXG8 535 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 GPR149Q86SP6 731 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 MAPKAPK5Q8IW41 473 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 EFHBQ8N7U6 833 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 RNF169Q8NCN4 708 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 KLK15Q9H2R5 256 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 TMX1Q9H3N1 280 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 OXSMQ9NWU1 459 aa4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 ZNF70Q9UC06 446 aaPredicted RBP4.42□□□□□ -1.7
HDGFL3-202ENST00000562702 A0A087X0B3 334 aa4.41□□□□□ -1.7
HDGFL3-202ENST00000562702 A0A1W2PR48 441 aa4.41□□□□□ -1.7
HDGFL3-202ENST00000562702 ZNF891A8MT65 544 aaPredicted RBP4.41□□□□□ -1.7
HDGFL3-202ENST00000562702 PRAMEF4O60810 478 aa4.41□□□□□ -1.7
HDGFL3-202ENST00000562702 ONECUT2O95948 504 aa4.41□□□□□ -1.7
HDGFL3-202ENST00000562702 GASTP01350 101 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms