RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 OR5AN1Q8NGI8 311 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 GAB3Q8WWW8 586 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 TSR2Q969E8 191 aaKnown RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 FATE1Q969F0 183 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 RTFDC1Q9BY42 306 aaPredicted RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 PITHD1Q9GZP4 211 aaPredicted RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 C12orf65Q9H3J6 166 aaKnown RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 ZNF277Q9NRM2 450 aaPredicted RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 POLR3BQ9NW08 1133 aaPredicted RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 RGS17Q9UGC6 210 aaPredicted RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 DNAI1Q9UI46 699 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 RCAN3Q9UKA8 241 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 NOB1Q9ULX3 412 aaKnown RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 CDY2AQ9Y6F7 541 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 ARHGAP31Q2M1Z3 1444 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 FER1L4A9Z1Z3 1794 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 MED1Q15648 1581 aaPredicted RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 ATP7AQ04656 1500 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 SPATA31A6Q5VVP1 1343 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 MROH2AA6NES4 1674 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 ZNF20P17024 532 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 AKAP5P24588 427 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 ADKP55263 362 aaKnown RBP4.77□□□□□ -1.65
HERC1-215ENST00000561436 RAC3P60763 192 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 GTF2H3Q13889 308 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 LRRC41Q15345 812 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 SPATS1Q496A3 300 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 MUM1L1Q5H9M0 696 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 SLFN13Q68D06 897 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 TRIM68Q6AZZ1 485 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 MAGEB6Q8N7X4 407 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 CHST13Q8NET6 341 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 CFHR4Q92496 578 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 JADE3Q92613 823 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 CLIP3Q96DZ5 547 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 TMEM176AQ96HP8 235 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 DYDC2Q96IM9 177 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 AIFM3Q96NN9 605 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 OR14A2Q96R54 314 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 ADI1Q9BV57 179 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 CD248Q9HCU0 757 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 NMRK2Q9NPI5 230 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 SLC52A1Q9NWF4 448 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 PRSS50Q9UI38 385 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 LRRC7Q96NW7 1537 aa4.77□□□□□ -1.65
HERC1-215ENST00000561436 ABCA6Q8N139 1617 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 ERC2O15083 957 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 ARHGAP6O43182 974 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 PLIN1O60240 522 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 PCDHGA12O60330 932 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 CAND2O75155 1236 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 NDUFS2O75306 463 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 OFD1O75665 1012 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 FSBPO95073 299 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 RPLP2P05387 115 aaKnown RBP4.76□□□□□ -1.65
HERC1-215ENST00000561436 HNRNPLP14866 589 aaKnown RBP eCLIP4.76□□□□□ -1.65
HERC1-215ENST00000561436 MEOX1P50221 254 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 CDK17Q00537 523 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 KIF23Q02241 960 aaPredicted RBP4.76□□□□□ -1.65
HERC1-215ENST00000561436 SAFB2Q14151 953 aaKnown RBP eCLIP4.76□□□□□ -1.65
HERC1-215ENST00000561436 CDSNQ15517 529 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 SURF1Q15526 300 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 ZNF568Q3ZCX4 644 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 IFIT1BQ5T764 474 aaKnown RBP4.76□□□□□ -1.65
HERC1-215ENST00000561436 CCSAPQ6IQ19 270 aaPredicted RBP4.76□□□□□ -1.65
HERC1-215ENST00000561436 KCNK18Q7Z418 384 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 FUKQ8N0W3 1084 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 Q8TCH9 128 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 PLA2G12BQ9BX93 195 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 SIGLEC1Q9BZZ2 1709 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 AGO3Q9H9G7 860 aaKnown RBP4.76□□□□□ -1.65
HERC1-215ENST00000561436 PRDM11Q9NQV5 511 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 OAZ3Q9UMX2 235 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 PCDHGA9Q9Y5G4 932 aaKnown RBP4.76□□□□□ -1.65
HERC1-215ENST00000561436 PCDHGA8Q9Y5G5 932 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 PCDHGA7Q9Y5G6 932 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 PCDHGA6Q9Y5G7 932 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 PCDHGA3Q9Y5H0 932 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 PCDHGA2Q9Y5H1 932 aa4.76□□□□□ -1.65
HERC1-215ENST00000561436 SETD1BQ9UPS6 1966 aaKnown RBP4.76□□□□□ -1.65
HERC1-215ENST00000561436 CCDC141Q6ZP82 1450 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 ZNF644Q9H582 1327 aaPredicted RBP4.75□□□□□ -1.65
HERC1-215ENST00000561436 UGGT1Q9NYU2 1555 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 DAPK3O43293 454 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 KRT18P05783 430 aaKnown RBP4.75□□□□□ -1.65
HERC1-215ENST00000561436 ADRB1P08588 477 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 CR2P20023 1033 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 TBX4P57082 545 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 ATP2C1P98194 919 aaPredicted RBP4.75□□□□□ -1.65
HERC1-215ENST00000561436 MEF2AQ02078 507 aaPredicted RBP4.75□□□□□ -1.65
HERC1-215ENST00000561436 MALLQ13021 153 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 TCIRG1Q13488 830 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 TRIM25Q14258 630 aaKnown RBP4.75□□□□□ -1.65
HERC1-215ENST00000561436 PUM1Q14671 1186 aaKnown RBP eCLIP4.75□□□□□ -1.65
HERC1-215ENST00000561436 UAP1L1Q3KQV9 507 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 ZMAT1Q5H9K5 638 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 RRP12Q5JTH9 1297 aaKnown RBP4.75□□□□□ -1.65
HERC1-215ENST00000561436 BTNL9Q6UXG8 535 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 USP30Q70CQ3 517 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 SPRED1Q7Z699 444 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms