RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PPP1R21Q6ZMI0 780 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 MRRFQ96E11 262 aaKnown RBP17.62■□□□□ 0.41
TPM1-228ENST00000560975 ASB3Q9Y575 518 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 MYO3BQ8WXR4 1341 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 GSTTP1A0A1W2PQM5 241 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 NVLO15381 856 aaKnown RBP17.62■□□□□ 0.41
TPM1-228ENST00000560975 SPATA31C1P0DKV0 1188 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 ACADSP16219 412 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 MYL7Q01449 175 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 LBRQ14739 615 aaKnown RBP17.62■□□□□ 0.41
TPM1-228ENST00000560975 KHDC1Q4VXA5 237 aaKnown RBP17.62■□□□□ 0.41
TPM1-228ENST00000560975 ASPRV1Q53RT3 343 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 CYP4F22Q6NT55 531 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 MYCT1Q8N699 235 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 LRRC8CQ8TDW0 803 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 FAM118BQ9BPY3 351 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 ZNF652Q9Y2D9 606 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 CNGA1P29973 690 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 ADCY8P40145 1251 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 ENDOVQ8N8Q3 282 aaKnown RBP17.61■□□□□ 0.41
TPM1-228ENST00000560975 WHRNQ9P202 907 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 FRMPD4Q14CM0 1322 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 FAM47DPA6NHR8 397 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 GCLCP48506 637 aaPredicted RBP17.61■□□□□ 0.41
TPM1-228ENST00000560975 YARSP54577 528 aaKnown RBP17.61■□□□□ 0.41
TPM1-228ENST00000560975 TAF1BQ53T94 588 aaPredicted RBP17.61■□□□□ 0.41
TPM1-228ENST00000560975 TMEM63BQ5T3F8 832 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 SLC30A10Q6XR72 485 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 RBBP8NLQ8NC74 664 aaPredicted RBP17.61■□□□□ 0.41
TPM1-228ENST00000560975 C7orf43Q8WVR3 580 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 SNF8Q96H20 258 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 WNT8AQ9H1J5 351 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 MTMR4Q9NYA4 1195 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 WDR35Q9P2L0 1181 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 ANAPC5Q9UJX4 755 aa17.61■□□□□ 0.41
TPM1-228ENST00000560975 GSTO1P78417 241 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 RHBDF2Q6PJF5 856 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 INPP5DQ92835 1189 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 RTFDC1Q9BY42 306 aaPredicted RBP17.6■□□□□ 0.41
TPM1-228ENST00000560975 ANKRD2Q9GZV1 360 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 VCXQ9H320 206 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 RGL1Q9NZL6 768 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 LOC102724428A0A0B4J2F2 783 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 CDH16O75309 829 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 AKR1B1P15121 316 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 SIK1P57059 783 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 KIF22Q14807 665 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 GRIPAP1Q4V328 841 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 DPP8Q6V1X1 898 aaPredicted RBP17.6■□□□□ 0.41
TPM1-228ENST00000560975 ZC3H18Q86VM9 953 aaKnown RBP17.6■□□□□ 0.41
TPM1-228ENST00000560975 WDR66Q8TBY9 1149 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 PCDHB18PQ96TA0 734 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 NUP85Q9BW27 656 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 STARD13Q9Y3M8 1113 aa17.6■□□□□ 0.41
TPM1-228ENST00000560975 ADGRA3Q8IWK6 1321 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 FAM196BA6NMK8 535 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 FAM13AO94988 1023 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 EYA4O95677 639 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 ITIH2P19823 946 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 PPP4CP60510 307 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 LAMB3Q13751 1172 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 SGSM1Q2NKQ1 1148 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 WASHC2DQ5SRD0 308 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 HP1BP3Q5SSJ5 553 aaPredicted RBP17.59■□□□□ 0.41
TPM1-228ENST00000560975 ARHGEF19Q8IW93 802 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 C4orf33Q8N1A6 199 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 ANKRD35Q8N283 1001 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 ERMNQ8TAM6 284 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 ZNF564Q8TBZ8 553 aaPredicted RBP17.59■□□□□ 0.41
TPM1-228ENST00000560975 ZNF333Q96JL9 665 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 ANO3Q9BYT9 981 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 ZMYM2Q9UBW7 1377 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 ATF2P15336 505 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 BMT2Q1RMZ1 405 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 CAPN12Q6ZSI9 719 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 DTX3LQ8TDB6 740 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 KIFAP3Q92845 792 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 KAT5Q92993 513 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 CD101Q93033 1021 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 GRID1Q9ULK0 1009 aa17.59■□□□□ 0.41
TPM1-228ENST00000560975 ATP9AO75110 1047 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 DCTN3O75935 186 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 SPIRE1Q08AE8 756 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 ZNF543Q08ER8 600 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 PICALMQ13492 652 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 MOGSQ13724 837 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 RCN1Q15293 331 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 FOXB2Q5VYV0 432 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 OR52E8Q6IFG1 317 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 LRRC19Q9H756 370 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 DCLRE1BQ9H816 532 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 SCOCQ9UIL1 159 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 USP20Q9Y2K6 914 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 FRMD4BQ9Y2L6 1034 aa17.58■□□□□ 0.41
TPM1-228ENST00000560975 POC1B-GALNT4F8VUJ3 575 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 ABLIM1O14639 778 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 SGPL1O95470 568 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 LDHCP07864 332 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 RPA1P27694 616 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 HADHBP55084 474 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms