RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 KIAA1468Q9P260 1216 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 PARP2Q9UGN5 583 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 AGO2Q9UKV8 859 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 DERAQ9Y315 318 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 ANK1P16157 1881 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 LINC01553A4QN01 128 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 ARL5CA6NH57 179 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 TTLL13PA6NNM8 815 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 C5orf67F2Z3F1 127 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 PSMA7O14818 248 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 IL18RAPO95256 599 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 SLC34A2O95436 690 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 THP07101 528 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 CA3P07451 260 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 CASP1P29466 404 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 ALDH7A1P49419 539 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 CASP5P51878 434 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 ERVK-21P61565 698 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 BMS1Q14692 1282 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 CLLU1OSQ5K130 101 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 ZBTB33Q86T24 672 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 SLC9A9Q8IVB4 645 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 KIAA0895Q8NCT3 520 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 HELQQ8TDG4 1101 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 DHTKD1Q96HY7 919 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 UROC1Q96N76 676 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 C11orf84Q9BUA3 381 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 NXF3Q9H4D5 531 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 RPF1Q9H9Y2 349 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 SNTG2Q9NY99 539 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 DACH1Q9UI36 760 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 TRAF3IP3Q9Y228 551 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 MYO9BQ13459 2157 aa13.14□□□□□ -0.31
RABGGTA-215ENST00000560207 BICDL2A1A5D9 508 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 GRXCR1A8MXD5 290 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 EXTL3O43909 919 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 RECQL4O94761 1208 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 LETM1O95202 739 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 ALDH2P05091 517 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 EDN1P05305 212 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 ADRB2P07550 413 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 FGFR1P11362 822 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 KCNE1P15382 129 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 BMPR1AP36894 532 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 RABGGTBP53611 331 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 UBE3AQ05086 875 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 LRRC63Q05C16 580 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 PPP2R3AQ06190 1150 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 ENPEPQ07075 957 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 EDRF1Q3B7T1 1238 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 XKR4Q5GH76 650 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 SPOUT1Q5T280 376 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 CDR2LQ86X02 465 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 THNSL1Q8IYQ7 743 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 GPD1LQ8N335 351 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 XXYLT1Q8NBI6 393 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 TSG101Q99816 390 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 LMAN2LQ9H0V9 348 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 ZNF576Q9H609 170 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 LMCD1Q9NZU5 365 aa13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 CPSF3Q9UKF6 684 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-215ENST00000560207 ZNF233A6NK53 670 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 ANKRD63C9JTQ0 380 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 MAPK13O15264 365 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 PRKCSHP14314 528 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 CYP3A5P20815 502 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 MLH1P40692 756 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 TAP1Q03518 808 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 KRT17Q04695 432 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 TUSC3Q13454 348 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 PDE12Q6L8Q7 609 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 SLC39A4Q6P5W5 647 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 ALKAL1Q6UXT8 129 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 TMEM192Q8IY95 271 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 MLKLQ8NB16 471 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 CACTINQ8WUQ7 758 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 LPPQ93052 612 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 ZBTB45Q96K62 511 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 ZNF558Q96NG5 402 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 GAD1Q99259 594 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 APOL6Q9BWW8 343 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 NKX2-4Q9H2Z4 354 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 AGPAT3Q9NRZ7 376 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 RNF19AQ9NV58 838 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 TBC1D13Q9NVG8 400 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 CNTN3Q9P232 1028 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 PUF60Q9UHX1 559 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 LZTS1Q9Y250 596 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 FRMD4BQ9Y2L6 1034 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 GDAQ9Y2T3 454 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 YBX2Q9Y2T7 364 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 C2CD2Q9Y426 696 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 HES2Q9Y543 173 aa13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 RANBP2P49792 3224 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-215ENST00000560207 TTC26A0AVF1 554 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 TGFB1I1O43294 461 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 FAM189A1O60320 539 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 FGFR1OPO95684 399 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms