RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 SMG7Q92540 1137 aaKnown RBP12.32□□□□□ -0.44
HERC1-204ENST00000559715 RTP3Q9BQQ7 232 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 CLSTN3Q9BQT9 956 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 PRKD2Q9BZL6 878 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 TMEM60Q9H2L4 133 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 MFSD1Q9H3U5 465 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 FZD8Q9H461 694 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 PLEKHA4Q9H4M7 779 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 GPRC5CQ9NQ84 441 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 KLK14Q9P0G3 267 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 ADAM28Q9UKQ2 775 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 PCDHA12Q9UN75 941 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 SSX2IPQ9Y2D8 614 aa12.32□□□□□ -0.44
HERC1-204ENST00000559715 KMT2BQ9UMN6 2715 aaPredicted RBP12.31□□□□□ -0.44
HERC1-204ENST00000559715 BTBD18B2RXH4 712 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 ADAM12O43184 909 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 CFHP08603 1231 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 SRFP11831 508 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 ME3Q16798 604 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 USP41Q3LFD5 358 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 CDCA2Q69YH5 1023 aaPredicted RBP12.31□□□□□ -0.44
HERC1-204ENST00000559715 SLC27A1Q6PCB7 646 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 PRSS55Q6UWB4 352 aaPredicted RBP12.31□□□□□ -0.44
HERC1-204ENST00000559715 CD300LGQ6UXG3 332 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 MAML2Q8IZL2 1156 aaPredicted RBP12.31□□□□□ -0.44
HERC1-204ENST00000559715 NECAB1Q8N987 351 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 LNX1Q8TBB1 728 aaPredicted RBP12.31□□□□□ -0.44
HERC1-204ENST00000559715 GPR152Q8TDT2 470 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 BSNDQ8WZ55 320 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 NKD2Q969F2 451 aaPredicted RBP12.31□□□□□ -0.44
HERC1-204ENST00000559715 APOL6Q9BWW8 343 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 TTC12Q9H892 705 aaPredicted RBP12.31□□□□□ -0.44
HERC1-204ENST00000559715 ZDHHC7Q9NXF8 308 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 ORC3Q9UBD5 711 aaPredicted RBP12.31□□□□□ -0.44
HERC1-204ENST00000559715 USP20Q9Y2K6 914 aa12.31□□□□□ -0.44
HERC1-204ENST00000559715 TPRP12270 2363 aaKnown RBP12.3□□□□□ -0.44
HERC1-204ENST00000559715 ZMYND10O75800 440 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 CDKL5O76039 1030 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 NPTXRO95502 500 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 XRCC6P12956 609 aaKnown RBP eCLIP12.3□□□□□ -0.44
HERC1-204ENST00000559715 GBP2P32456 591 aaPredicted RBP12.3□□□□□ -0.44
HERC1-204ENST00000559715 GRIK3Q13003 919 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 FAM187BQ17R55 369 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 PHLDB3Q6NSJ2 640 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 ADSSL1Q8N142 457 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 NSUN7Q8NE18 718 aaKnown RBP12.3□□□□□ -0.44
HERC1-204ENST00000559715 RIN2Q8WYP3 895 aaPredicted RBP12.3□□□□□ -0.44
HERC1-204ENST00000559715 FGF14Q92915 247 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 NXPE3Q969Y0 559 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 NAP1L4Q99733 375 aaKnown RBP12.3□□□□□ -0.44
HERC1-204ENST00000559715 COLEC11Q9BWP8 271 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 CCDC113Q9H0I3 377 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 POLR3FQ9H1D9 316 aaPredicted RBP12.3□□□□□ -0.44
HERC1-204ENST00000559715 SLC2A4RGQ9NR83 387 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.3□□□□□ -0.44
HERC1-204ENST00000559715 FBXW11Q9UKB1 542 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 LAMA1P25391 3075 aa12.3□□□□□ -0.44
HERC1-204ENST00000559715 POTEMA6NI47 508 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 SHISA7A6NL88 538 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 JAK2O60674 1132 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 MED24O75448 989 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 KIF4AO95239 1232 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 KRT2P35908 639 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 NTHL1P78549 312 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 TFDP1Q14186 410 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 HSP90AA2PQ14568 343 aaPredicted RBP12.29□□□□□ -0.44
HERC1-204ENST00000559715 RSPO2Q6UXX9 243 aaPredicted RBP12.29□□□□□ -0.44
HERC1-204ENST00000559715 CATSPER3Q86XQ3 398 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 GLYCTKQ8IVS8 523 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 PIK3R5Q8WYR1 880 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 GTF3C6Q969F1 213 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 DDX23Q9BUQ8 820 aaKnown RBP12.29□□□□□ -0.44
HERC1-204ENST00000559715 PDZD7Q9H5P4 517 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 TBC1D17Q9HA65 648 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.29□□□□□ -0.44
HERC1-204ENST00000559715 PPP4R2Q9NY27 417 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 FBXL21Q9UKT6 434 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 CA14Q9ULX7 337 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 NUMBLQ9Y6R0 609 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 CHD8Q9HCK8 2581 aa12.29□□□□□ -0.44
HERC1-204ENST00000559715 LRRN2O75325 713 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 BAG4O95429 457 aaKnown RBP12.28□□□□□ -0.44
HERC1-204ENST00000559715 DCNP07585 359 aaKnown RBP12.28□□□□□ -0.44
HERC1-204ENST00000559715 TXKP42681 527 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 STARD6P59095 220 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 TUSC3Q13454 348 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 CALCRLQ16602 461 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 EEF1DP3Q658K8 133 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 PARM1Q6UWI2 310 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 STAMQ92783 540 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 PRIMPOLQ96LW4 560 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 DPP7Q9UHL4 492 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 COL4A2P08572 1712 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 ACACBO00763 2458 aa12.28□□□□□ -0.44
HERC1-204ENST00000559715 PDCD11Q14690 1871 aaKnown RBP12.27□□□□□ -0.44
HERC1-204ENST00000559715 CITO14578 2027 aa12.27□□□□□ -0.44
HERC1-204ENST00000559715 SPDYE4A6NLX3 237 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 NEMFO60524 1076 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 USO1O60763 962 aaKnown RBP12.27□□□□□ -0.45
HERC1-204ENST00000559715 RECQL4O94761 1208 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms