RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TADA2AO75478 443 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 H2AFXP16104 143 aaPredicted RBP11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 CCDC60Q8IWA6 550 aaPredicted RBP11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 CD99L2Q8TCZ2 262 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 NSMCE1Q8WV22 266 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 L2HGDHQ9H9P8 463 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 NHEJ1Q9H9Q4 299 aaPredicted RBP11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 RAB20Q9NX57 234 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 HPSEQ9Y251 543 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 UBIAD1Q9Y5Z9 338 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 LGALS2P05162 132 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 NAMPTP43490 491 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 C2orf54Q08AI8 447 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 BFSP2Q13515 415 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 MFSD10Q14728 455 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 EDRF1Q3B7T1 1238 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 CCDC105Q8IYK2 499 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 NKX2-3Q8TAU0 364 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 RNF139Q8WU17 664 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 TBC1D31Q96DN5 1066 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 ASIC3Q9UHC3 531 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 CLTAP09496 248 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 RBP5P82980 135 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 PPP2R5CQ13362 524 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 GLRA4Q5JXX5 417 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 CELF3Q5SZQ8 465 aaKnown RBP11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 TMEM35BQ8NCS4 154 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 HAS1Q92839 578 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 ZNF560Q96MR9 790 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 PRG3Q9Y2Y8 225 aaPredicted RBP11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 CPB1P15086 417 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 RAG1P15918 1043 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 SLC8A1P32418 973 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 PSEN2P49810 448 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 EPHB4P54760 987 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 NCOA4Q13772 614 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 SETDB1Q15047 1291 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 NOL9Q5SY16 702 aaKnown RBP11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 KAZNQ674X7 775 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 NFRKBQ6P4R8 1299 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 DEFB128Q7Z7B8 93 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 PNMA5Q96PV4 448 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 CCDC77Q9BR77 488 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 SENP6Q9GZR1 1112 aaPredicted RBP11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 UTP11Q9Y3A2 253 aaKnown RBP11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 ATP8B3O60423 1300 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 LRRC53A6NM62 1247 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 TRAPPC3O43617 180 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 MFAP3LO75121 409 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 NDUFA10O95299 355 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 TBXAS1P24557 533 aaPredicted RBP11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 KIF11P52732 1056 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 AP3M2P53677 418 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 VSNL1P62760 191 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 AGPAT3Q9NRZ7 376 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 ADAM22Q9P0K1 906 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 CEP72Q9P209 647 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 ADGRG1Q9Y653 693 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 TTC26A0AVF1 554 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 GPR182O15218 404 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 EIF3DO15371 548 aaKnown RBP eCLIP11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 AOC2O75106 756 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 STK10O94804 968 aaKnown RBP11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 ZNF18P17022 549 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 GGCXP38435 758 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 OR1G1P47890 313 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 MRPS25P82663 173 aaKnown RBP11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 LAMTOR4Q0VGL1 99 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 PDCLQ13371 301 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 MTF1Q14872 753 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 TRIM11Q96F44 468 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 MTMR9Q96QG7 549 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 MRPL47Q9HD33 250 aaKnown RBP11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 RBPJLQ9UBG7 517 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 USP20Q9Y2K6 914 aa11.38□□□□□ -0.59
CARMIL3-202ENST00000559694 CA12O43570 354 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 CXCR5P32302 372 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 NNTQ13423 1086 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 KCNK18Q7Z418 384 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 N4BP2L2Q92802 583 aaPredicted RBP11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 NCAPGQ9BPX3 1015 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 NGRNQ9NPE2 291 aaKnown RBP11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 A6NJR5 290 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 PSMD10O75832 226 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 NME8Q8N427 588 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 C12orf42Q96LP6 360 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 TEPSINQ96N21 525 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 SRGAP2O75044 1071 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 GHRP10912 638 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 FGFR4P22455 802 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 CRHR2Q13324 411 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 MTMR3Q13615 1198 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 C6orf163Q5TEZ5 329 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 NAA35Q5VZE5 725 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 ZNF720Q7Z2F6 126 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 MAP7D3Q8IWC1 876 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 CBWD1Q9BRT8 395 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 TRIM7Q9C029 511 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 KCNMB3Q9NPA1 279 aa11.37□□□□□ -0.59
CARMIL3-202ENST00000559694 CNTNAP1P78357 1384 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms