RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 GSTCDQ8NEC7 633 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 ENOX1Q8TC92 643 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 POMGNT1Q8WZA1 660 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 BICD1Q96G01 975 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 LBHD1Q9BQE6 289 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 MSTO1Q9BUK6 570 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 HSD3B7Q9H2F3 369 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 CXXC1Q9P0U4 656 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 DACH1Q9UI36 760 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 AGO2Q9UKV8 859 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 TRIP11Q15643 1979 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 TTC26A0AVF1 554 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 BICDL2A1A5D9 508 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 MEIS3P2A8K0S8 358 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 CLIC2O15247 247 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 CLTAP09496 248 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 STAG3L1P0CL83 205 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 TNFSF9P41273 254 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 DEFB103AP81534 67 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 FKBP3Q00688 224 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 IQCB1Q15051 598 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 SLC10A6Q3KNW5 377 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 LRIT3Q3SXY7 679 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 ARMCX5Q6P1M9 558 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 APBB1IPQ7Z5R6 666 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 IRF2BP1Q8IU81 584 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 NPAS4Q8IUM7 802 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 GPD1LQ8N335 351 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 XXYLT1Q8NBI6 393 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 RSPH1Q8WYR4 309 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 ZNF689Q96CS4 500 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 MFSD14AQ96MC6 490 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 MKNK1Q9BUB5 465 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 DNAJC25Q9H1X3 360 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 KIAA1586Q9HCI6 787 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 ANKFY1Q9P2R3 1169 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 CTNND2Q9UQB3 1225 aa16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 LAMA2P24043 3122 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-207ENST00000559309 IKBKBO14920 756 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 AKAP3O75969 853 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 CAVIN2O95810 425 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 NR2F2P24468 414 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 CASP4P49662 377 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 WNT7BP56706 349 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 CLDN10P78369 228 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 HTRA4P83105 476 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 NAB2Q15742 525 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 ENOX2Q16206 610 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 ANO6Q4KMQ2 910 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 CLLU1OSQ5K130 101 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 C9orf50Q5SZB4 431 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 OTOP2Q7RTS6 562 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 ZBTB33Q86T24 672 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 BRSK2Q8IWQ3 736 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 PHOSPHO2Q8TCD6 241 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 CEP63Q96MT8 703 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 TCHPQ9BT92 498 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 SNTG2Q9NY99 539 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 CNTN3Q9P232 1028 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 GIT1Q9Y2X7 761 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 HES2Q9Y543 173 aa16.14■□□□□ 0.17
SNRPA1-207ENST00000559309 SLC16A3O15427 465 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 DGKIO75912 1065 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 ADAM9Q13443 819 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 ZBTB6Q15916 424 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 SNRNP35Q16560 246 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 KLHL10Q6JEL2 608 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 FILIP1Q7Z7B0 1213 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 CBWD2Q8IUF1 395 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 PLEKHO2Q8TD55 490 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 PGBD4Q96DM1 585 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 SAAL1Q96ER3 474 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 SNX27Q96L92 541 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 CXCL16Q9H2A7 254 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 PCIF1Q9H4Z3 704 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 PLEKHA5Q9HAU0 1116 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 UBN1Q9NPG3 1134 aa16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 RNF216Q9NWF9 866 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-207ENST00000559309 PTGESO14684 152 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 OFD1O75665 1012 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 RECQL4O94761 1208 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 KCNE1P15382 129 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 RPL13P26373 211 aaKnown RBP16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 ACOT2P49753 483 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 STX17P56962 302 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 SHHQ15465 462 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 SEZ6Q53EL9 994 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 C1orf220Q5T0J3 134 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 CDKAL1Q5VV42 579 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 SPATA1Q5VX52 437 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 DHX40Q8IX18 779 aaKnown RBP16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 THNSL1Q8IYQ7 743 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 SP7Q8TDD2 431 aaPredicted RBP16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 LPPQ93052 612 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 CASD1Q96PB1 797 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 TSPAN18Q96SJ8 248 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 SLC9A7Q96T83 725 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 TSG101Q99816 390 aa16.12■□□□□ 0.17
SNRPA1-207ENST00000559309 ASB7Q9H672 318 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms